RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 STRA6Q9BX79 667 aa28.04■■■□□ 2.08
SMARCD3-203ENST00000392811 GBP3Q9H0R5 595 aa28.04■■■□□ 2.08
SMARCD3-203ENST00000392811 SIX2Q9NPC8 291 aa28.04■■■□□ 2.08
SMARCD3-203ENST00000392811 ZNF112Q9UJU3 913 aa28.04■■■□□ 2.08
SMARCD3-203ENST00000392811 PNMA2Q9UL42 364 aa28.04■■■□□ 2.08
SMARCD3-203ENST00000392811 A0A087X0T9 212 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 FAM228BP0C875 321 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 IRF2BP2Q7Z5L9 587 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 HNRNPLLQ8WVV9 542 aaKnown RBP28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 SPAG5Q96R06 1193 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 PXMP2Q9NR77 195 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 TBC1D22BQ9NU19 505 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 DMAC2Q9NW81 257 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 GCNT4Q9P109 453 aa28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 DBR1Q9UK59 544 aaKnown RBP28.03■■■□□ 2.08
SMARCD3-203ENST00000392811 PPP1R37O75864 691 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 QARSP47897 775 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 PRAMEF18Q5VWM3 479 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 NSMFQ6X4W1 530 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 MAEAQ7L5Y9 396 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 WRNIP1Q96S55 665 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 PDCD2LQ9BRP1 358 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 LUC7LQ9NQ29 371 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 ZNF541Q9H0D2 1346 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 GTPBP10A4D1E9 387 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 PDE2AO00408 941 aaPredicted RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 PPP1R12BO60237 982 aaPredicted RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 FDX1P10109 184 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 CYP2J2P51589 502 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 RNF10Q8N5U6 811 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 ZNF280CQ8ND82 737 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 CAGE1Q8TC20 777 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 RPGRIP1Q96KN7 1286 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 FUT8Q9BYC5 575 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 ADAMTS1Q9UHI8 967 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 FZD1Q9UP38 647 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 RIPK3Q9Y572 518 aa28.02■■■□□ 2.08
SMARCD3-203ENST00000392811 PTPRAP18433 802 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 RARRES1P49788 294 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 VSNL1P62760 191 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 NOX5Q96PH1 765 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 AS3MTQ9HBK9 375 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 PICK1Q9NRD5 415 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 FBXL5Q9UKA1 691 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 AJAP1Q9UKB5 411 aaPredicted RBP28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 CD2APQ9Y5K6 639 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 MYH10P35580 1976 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 BUB1O43683 1085 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 ANGEL2Q5VTE6 544 aaKnown RBP28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 RBM46Q8TBY0 533 aaKnown RBP28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 ST7Q9NRC1 585 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 RNF146Q9NTX7 359 aa28.01■■■□□ 2.07
SMARCD3-203ENST00000392811 ATP9AO75110 1047 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 LYPLA2O95372 231 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 PRLRP16471 622 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 PTK2Q05397 1052 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 PLS1Q14651 629 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 BEND6Q5SZJ8 279 aaPredicted RBP28■■■□□ 2.07
SMARCD3-203ENST00000392811 ARHGEF16Q5VV41 709 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 FRMD4BQ9Y2L6 1034 aa28■■■□□ 2.07
SMARCD3-203ENST00000392811 K7ENM7 598 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 UGCGQ16739 394 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 SYCP3Q8IZU3 236 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 GOLGA5Q8TBA6 731 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 ERLIN1O75477 346 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 TUBBP07437 444 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 JAM2P57087 298 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 BAATQ14032 418 aaPredicted RBP27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 NAB2Q15742 525 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 ZNF571Q7Z3V5 609 aaPredicted RBP27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 CREG2Q8IUH2 290 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 UBE2Q2Q8WVN8 375 aa27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 LARSQ9P2J5 1176 aaKnown RBP27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 BZW2Q9Y6E2 419 aaKnown RBP27.99■■■□□ 2.07
SMARCD3-203ENST00000392811 YWHABP31946 246 aaKnown RBP27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 GJB7Q6PEY0 223 aa27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 REPS2Q8NFH8 660 aa27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 COG1Q8WTW3 980 aa27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 ABCB6Q9NP58 842 aa27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 RNF216Q9NWF9 866 aaPredicted RBP27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 RLFQ13129 1914 aa27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 COL11A1P12107 1806 aaPredicted RBP27.98■■■□□ 2.07
SMARCD3-203ENST00000392811 TESPA1A2RU30 521 aaPredicted RBP27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 FMO5P49326 533 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 HMGCS2P54868 508 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 NAP1L1P55209 391 aaKnown RBP27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 IQCEQ6IPM2 695 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 NFRKBQ6P4R8 1299 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 APOBEC3FQ8IUX4 373 aaKnown RBP27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 SLC9A9Q8IVB4 645 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 OSBPL9Q96SU4 736 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 SH2D3AQ9BRG2 576 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 PACSIN1Q9BY11 444 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 HYOU1Q9Y4L1 999 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 TMEM150BA6NC51 233 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 NCK2O43639 380 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 CCNE2O96020 404 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 KLRC1P26715 233 aa27.97■■■□□ 2.07
SMARCD3-203ENST00000392811 PRKCIP41743 596 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms