RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 KRT85P78386 507 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CEBPZQ03701 1054 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 PPIGQ13427 754 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 STK38Q15208 465 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 TRIM71Q2Q1W2 868 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 MTERF2Q49AM1 385 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 XKR9Q5GH70 373 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 FAM26DQ5JW98 314 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 EFCAB12Q6NXP0 572 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 TRMT1LQ7Z2T5 733 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 KRI1Q8N9T8 703 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 USP38Q8NB14 1042 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 BADQ92934 168 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CALML4Q96GE6 196 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CCDC43Q96MW1 224 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CEP89Q96ST8 783 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 GDF15Q99988 308 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 CCSER1Q9C0I3 900 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SCAND2PQ9GZW5 306 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 DHX33Q9H6R0 707 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 WRAP73Q9P2S5 460 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 TFIP11Q9UBB9 837 aaKnown RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 FBXO2Q9UK22 296 aaPredicted RBP7.55□□□□□ -1.2
UBBP1-201ENST00000392399 DNM3Q9UQ16 869 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 ZDHHC9Q9Y397 364 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
UBBP1-201ENST00000392399 ASAP2O43150 1006 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CUTAO60888 179 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 DGAT1O75907 488 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 ITGB8P26012 769 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 MARCKSP29966 332 aaPredicted RBP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CYP2C18P33260 490 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 TXLNAP40222 546 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 MAGEA10P43363 369 aaPredicted RBP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 RARRES1P49788 294 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 POLGP54098 1239 aaPredicted RBP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CCL23P55773 120 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 NPEPPSP55786 919 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 DNM1Q05193 864 aaKnown RBP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 FPGSQ05932 587 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 ODR4Q5SWX8 454 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 ZNF618Q5T7W0 954 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 RUFY4Q6ZNE9 571 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 LRRC8DQ7L1W4 858 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CABP7Q86V35 215 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 KIAA0319LQ8IZA0 1049 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 METTL13Q8N6R0 699 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 LINC01465Q8N7H1 131 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 TRAPPC12Q8WVT3 735 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 DNAJB3Q8WWF6 145 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 TCP11Q8WWU5 503 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CDK5RAP3Q96JB5 506 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 MAP7D2Q96T17 732 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 MMTAG2Q9BU76 263 aaKnown RBP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 PPP1R12CQ9BZL4 782 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 FTOQ9C0B1 505 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CSRNP2Q9H175 543 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 IL23AQ9NPF7 189 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 CCDC39Q9UFE4 941 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 ALPK3Q96L96 1907 aa7.54□□□□□ -1.2
UBBP1-201ENST00000392399 A0A1W2PPC1 479 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 ARHGEF35A5YM69 484 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 ZBTB39O15060 712 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 EFCAB14O75071 495 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 EYA4O95677 639 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 FGBP02675 491 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 CXCL10P02778 98 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 ACTN1P12814 892 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 CSF2RAP15509 400 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 CDC25AP30304 524 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 CRYBB1P53674 252 aaPredicted RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MRPS6P82932 125 aaKnown RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 POU5F1BQ06416 359 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MGAT3Q09327 533 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MXD4Q14582 209 aaPredicted RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 PLA2G4FQ68DD2 849 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 PSRC1Q6PGN9 363 aaPredicted RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 TRAF7Q6Q0C0 670 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MCPH1Q8NEM0 835 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 PIGOQ8TEQ8 1089 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 WNT8BQ93098 351 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MTRQ99707 1265 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 TIPINQ9BVW5 301 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 CELF4Q9BZC1 486 aaKnown RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 INO80BQ9C086 356 aaPredicted RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 UBE2OQ9C0C9 1292 aaKnown RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 DDX19AQ9NUU7 478 aaKnown RBP7.53□□□□□ -1.2
UBBP1-201ENST00000392399 KCND2Q9NZV8 630 aa7.53□□□□□ -1.2
UBBP1-201ENST00000392399 KCNG1Q9UIX4 513 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms