RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 HES6Q96HZ4 224 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 TAS2R14Q9NYV8 317 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 SUCLA2Q9P2R7 463 aaPredicted RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 C5orf60A6NFR6 353 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 MPHOSPH10O00566 681 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 EVI5O60447 810 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 CLTAP09496 248 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 POLD1P28340 1107 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 MSL1Q68DK7 614 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 RASGEF1CQ8N431 466 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 FBXO25Q8TCJ0 367 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 ARHGEF26Q96DR7 871 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 PRMT1Q99873 361 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 SLITRK6Q9H5Y7 841 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 BZW2Q9Y6E2 419 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 TMEM110-MUSTN1A8MSY1 372 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 BHMG1C9JSJ3 638 aaPredicted RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 TRIM37O94972 964 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 GCNT3O95395 438 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 MRPL12P52815 198 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 RHBDL3P58872 404 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 POU5F1Q01860 360 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 SLC29A2Q14542 456 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 EDRF1Q3B7T1 1238 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 PRR16Q569H4 304 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 ERMARDQ5T6L9 678 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 SLFN11Q7Z7L1 901 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 VPS36Q86VN1 386 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 PALB2Q86YC2 1186 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 LRRC34Q8IZ02 419 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
CCDC57-203ENST00000392343 EPB41L4BQ9H329 900 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 FAM114A2Q9NRY5 505 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 KDM3AQ9Y4C1 1321 aa15.18■□□□□ 0.02
CCDC57-203ENST00000392343 NAV1Q8NEY1 1877 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 SRRM3A6NNA2 597 aaPredicted RBP15.17■□□□□ 0.02
CCDC57-203ENST00000392343 HGSO14964 777 aaPredicted RBP15.17■□□□□ 0.02
CCDC57-203ENST00000392343 NR3C1P04150 777 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 VIMP08670 466 aaKnown RBP15.17■□□□□ 0.02
CCDC57-203ENST00000392343 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
CCDC57-203ENST00000392343 FRMD5Q7Z6J6 570 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 TBC1D1Q86TI0 1168 aaPredicted RBP15.17■□□□□ 0.02
CCDC57-203ENST00000392343 SLC35C1Q96A29 364 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 DAAM1Q9Y4D1 1078 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 ARHGAP44Q17R89 818 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 CCDC197Q8NCU1 140 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 FAM129AQ9BZQ8 928 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 NYXQ9GZU5 481 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 SEMA4AQ9H3S1 761 aa15.17■□□□□ 0.02
CCDC57-203ENST00000392343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■■■■■ 121.8
CCDC57-203ENST00000392343 GPR75-ASB3A0A0A6YYF3 556 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 CCT8L1PA6NM43 557 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 PAEPP09466 180 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 FGFR4P22455 802 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 PMS2P54278 862 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 ELF3P78545 371 aaPredicted RBP15.16■□□□□ 0.02
CCDC57-203ENST00000392343 ZNF543Q08ER8 600 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 WLSQ5T9L3 541 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 FOXR2Q6PJQ5 311 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 MGARPQ8TDB4 240 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 EPS8L3Q8TE67 593 aaKnown RBP15.16■□□□□ 0.02
CCDC57-203ENST00000392343 ALG3Q92685 438 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 TLCD1Q96CP7 247 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 THAP2Q9H0W7 228 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 DBR1Q9UK59 544 aaKnown RBP15.16■□□□□ 0.02
CCDC57-203ENST00000392343 FOXO6A8MYZ6 492 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 GNPATO15228 680 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
CCDC57-203ENST00000392343 PPFIA2O75334 1257 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 PRKCIP41743 596 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 COG2Q14746 738 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 LRRC14Q15048 493 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
CCDC57-203ENST00000392343 SYCE1Q8N0S2 351 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 ERP44Q9BS26 406 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 BHMT2Q9H2M3 363 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 CD209Q9NNX6 404 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 L3MBTL1Q9Y468 752 aa15.16■□□□□ 0.02
CCDC57-203ENST00000392343 LRRN2O75325 713 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 UFL1O94874 794 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 STAT1P42224 750 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 JAM2P57087 298 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
CCDC57-203ENST00000392343 HYIQ5T013 277 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 RDH13Q8NBN7 331 aa15.15■□□□□ 0.02
CCDC57-203ENST00000392343 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms