RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 LPPQ93052 612 aa3.38□□□□□ -1.87
RNU6-541P-201ENST00000384709 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZKSCAN5Q9Y2L8 839 aa3.38□□□□□ -1.87
RNU6-541P-201ENST00000384709 POLR2AP24928 1970 aaKnown RBP3.38□□□□□ -1.87
RNU6-541P-201ENST00000384709 UBA6A0AVT1 1052 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZNF891A8MT65 544 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 PATE3B3GLJ2 98 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 MATN2O00339 956 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 GPR42O15529 346 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 PDE8AO60658 829 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 KPNA6O60684 536 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 GAS7O60861 476 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZNF888P0CJ79 500 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 SLC9A1P19634 815 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 PTX3P26022 381 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ADCYAP1R1P41586 468 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 MASP1P48740 699 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 BCAR1P56945 870 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 NFKB2Q00653 900 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 OCRLQ01968 901 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ROM1Q03395 351 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 HGFACQ04756 655 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 MYBPC3Q14896 1274 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 WDR72Q3MJ13 1102 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 SPATS1Q496A3 300 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 TTC38Q5R3I4 469 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 AGBL4Q5VU57 503 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 CNNM4Q6P4Q7 775 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ARHGEF18Q6ZSZ5 1173 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 PHYKPLQ8IUZ5 450 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 IFNL2Q8IZJ0 200 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 NXPE1Q8N323 547 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZNF610Q8N9Z0 462 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 HIPK4Q8NE63 616 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 CHTF18Q8WVB6 975 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 CFHR4Q92496 578 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 NKD2Q969F2 451 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 PCIF1Q9H4Z3 704 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 WDR26Q9H7D7 661 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 CD248Q9HCU0 757 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 IFT57Q9NWB7 429 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 KCMF1Q9P0J7 381 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 DENND2AQ9ULE3 1009 aa3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 CTDP1Q9Y5B0 961 aaPredicted RBP3.37□□□□□ -1.87
RNU6-541P-201ENST00000384709 A0A0A6YYJ9 748 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 C1QTNF3-AMACRE9PGA6 284 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 ARHGAP6O43182 974 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZEB2O60315 1214 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 B4GALT4O60513 344 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 KRT37O76014 449 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 EYA4O95677 639 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 CD40P25942 277 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 MAGEA10P43363 369 aaPredicted RBP3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 RGS3P49796 1198 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 SCNN1BP51168 640 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 NEK4P51957 841 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 SESN2P58004 480 aaPredicted RBP3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 ADAM8P78325 824 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 MAP3K12Q12852 859 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 PCOLCEQ15113 449 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 TERF2Q15554 542 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 TBR1Q16650 682 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 TAF7LQ5H9L4 462 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 BMP8AQ7Z5Y6 402 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 PASD1Q8IV76 773 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 OR2W6PQ8NHA6 318 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 BDH2Q9BUT1 245 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 OSBPL6Q9BZF3 934 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 WNT8AQ9H1J5 351 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 JADE2Q9NQC1 790 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 H2AFY2Q9P0M6 372 aaPredicted RBP3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 ZDHHC9Q9Y397 364 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 PRKAB1Q9Y478 270 aa3.36□□□□□ -1.87
RNU6-541P-201ENST00000384709 K7ESM1 405 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 ELL2O00472 640 aaPredicted RBP3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 PRPF6O94906 941 aaKnown RBP3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 FKBP9O95302 570 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 HMGCRP04035 888 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 MYCLP1P12525 358 aaPredicted RBP3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 KPNA1P52294 538 aaPredicted RBP3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 ANTXR2P58335 489 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 SLC6A3Q01959 620 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 PLP2Q04941 152 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 DGKDQ16760 1214 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 RNF151Q2KHN1 245 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 SLFN12LQ6IEE8 588 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 KIAA1841Q6NSI8 718 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 USP30Q70CQ3 517 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 FKBP9P1Q75LS8 142 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 GPR155Q7Z3F1 870 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 SLC41A1Q8IVJ1 513 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 AFAP1L2Q8N4X5 818 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 NEIL1Q96FI4 390 aaPredicted RBP3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 OR10A2Q9H208 303 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 CAAP1Q9H8G2 361 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 EMC7Q9NPA0 242 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 SPTLC3Q9NUV7 552 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 PTPN22Q9Y2R2 807 aa3.35□□□□□ -1.87
RNU6-541P-201ENST00000384709 SLC30A1Q9Y6M5 507 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms