RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 MKL2Q9ULH7 1088 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CDK13Q14004 1512 aaKnown RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 SOS2Q07890 1332 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 DYNC1I2Q13409 638 aaKnown RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 GALNT17Q6IS24 598 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 TADA2BQ86TJ2 420 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 P2RX5Q93086 422 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ZNF274Q96GC6 653 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 KDM4CQ9H3R0 1056 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 DMAP1Q9NPF5 467 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 DPYSL4O14531 572 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 KCNA2P16389 499 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CCNA1P78396 465 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 MAN2A1Q16706 1144 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 LRRC8BQ6P9F7 803 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ASIC4Q96FT7 647 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 EYA1Q99502 592 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 OSBPL1AQ9BXW6 950 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CD109Q6YHK3 1445 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ARHGAP10A1A4S6 786 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 SERPING1P05155 500 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 FAM98CQ17RN3 349 aaKnown RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 TAS2R42Q7RTR8 314 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PASD1Q8IV76 773 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 FLT4P35916 1363 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 EIF3BP55884 814 aaKnown RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 DMTNQ08495 405 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 THEM5Q8N1Q8 247 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 AIPL1Q9NZN9 384 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 TTC7AQ9ULT0 858 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 AOX1Q06278 1338 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ZBTB7BO15156 539 aaPredicted RBP6.26□□□□□ -1.41
RFX3-204ENST00000382004 APBA3O96018 575 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 TSPY1Q01534 308 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 SEPT2Q15019 361 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PPP1R2P3Q6NXS1 205 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PKN3Q6P5Z2 889 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 C11orf74Q86VG3 221 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 TRIM69Q86WT6 500 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 TEX2Q8IWB9 1127 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ARL8AQ96BM9 186 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 DIABLOQ9NR28 239 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 RGL1Q9NZL6 768 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 PNMA6EA0A0J9YXQ4 647 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 S100A5P33763 92 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 NNMTP40261 264 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 BCAMP50895 628 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CTSWP56202 376 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ARL4CP56559 192 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 ECT2Q9H8V3 914 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
RFX3-204ENST00000382004 IL10P22301 178 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MAP4P27816 1152 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 ERFP50548 548 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MDH1BQ5I0G3 518 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MMS22LQ6ZRQ5 1243 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 ZNF555Q8NEP9 628 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 PIK3R5Q8WYR1 880 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 HEMGNQ9BXL5 484 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 TMEM206Q9H813 350 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 PTPN23Q9H3S7 1636 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 CTIFO43310 598 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 DEAF1O75398 565 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 ACTN3Q08043 901 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 AP1B1Q10567 949 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 PSMD2Q13200 908 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 PDCLQ13371 301 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 SPDYAQ5MJ70 313 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 THAP11Q96EK4 314 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 ATXN7L3BQ96GX2 97 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 DHTKD1Q96HY7 919 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 PARD6BQ9BYG5 372 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 C14orf93Q9H972 538 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 NDE1Q9NXR1 346 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 ARAP1Q96P48 1450 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 YTHDC2Q9H6S0 1430 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 MEFVO15553 781 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 NR5A1Q13285 461 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 SKIV2LQ15477 1246 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 MAGEB5Q9BZ81 275 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 FAM49AQ9H0Q0 323 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 ATP5HO75947 161 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MYL3P08590 195 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 SLC16A2P36021 539 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MXI1P50539 228 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 GYS2P54840 703 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 FASTKD1Q53R41 847 aaKnown RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 NUP93Q8N1F7 819 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MSTO1Q9BUK6 570 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 H2AFY2Q9P0M6 372 aaPredicted RBP6.25□□□□□ -1.41
RFX3-204ENST00000382004 MAP3K15Q6ZN16 1313 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MED23Q9ULK4 1368 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 MYO1GB0I1T2 1018 aa6.25□□□□□ -1.41
RFX3-204ENST00000382004 C5orf58C9J3I9 102 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms