RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CCDC91Q7Z6B0 441 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 IQCDQ96DY2 449 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 C12orf42Q96LP6 360 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 RHOXF2Q9BQY4 288 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 ZNF214Q9UL59 606 aaPredicted RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 PLAGL2Q9UPG8 496 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 POLR2AP24928 1970 aaKnown RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 C19orf81C9J6K1 198 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 EIF3JO75822 258 aaKnown RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 AKAP3O75969 853 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 P4HBP07237 508 aaKnown RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 CCDC172P0C7W6 258 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 FDX1P10109 184 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 CYLC1P35663 651 aaPredicted RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 CYP27A1Q02318 531 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 COG2Q14746 738 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 CACNA2D4Q7Z3S7 1137 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 EFCAB13Q8IY85 973 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 BAP1Q92560 729 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 LSM14BQ9BX40 385 aaKnown RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 FHDC1Q9C0D6 1143 aaPredicted RBP15.63■□□□□ 0.09
CLCN4-201ENST00000380829 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 PHIPQ8WWQ0 1821 aa15.63■□□□□ 0.09
CLCN4-201ENST00000380829 RLFQ13129 1914 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 TMEM150BA6NC51 233 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 TGFB1I1O43294 461 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CASP4P49662 377 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 VSNL1P62760 191 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 PLS1Q14651 629 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CASP8Q14790 479 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 FAM178BQ8IXR5 827 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLCN4-201ENST00000380829 NEK9Q8TD19 979 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 FIZ1Q96SL8 496 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 ARHGAP20Q9P2F6 1191 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 L1RE1Q9UN81 338 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 AFG3L2Q9Y4W6 797 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CEP83Q9Y592 693 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 PPP2R3BQ9Y5P8 575 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 ZMYM2Q9UBW7 1377 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 HIP1RO75146 1068 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 NOL4O94818 638 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CPP00450 1065 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 ZNF131P52739 623 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 PADI6Q6TGC4 694 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CATSPERGQ6ZRH7 1159 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 KIAA1328Q86T90 577 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CCDC170Q8IYT3 715 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 SAMD3Q8N6K7 520 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 CCDC42Q96M95 316 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 ARMCX3Q9UH62 379 aaPredicted RBP15.62■□□□□ 0.09
CLCN4-201ENST00000380829 PNMA2Q9UL42 364 aa15.62■□□□□ 0.09
CLCN4-201ENST00000380829 RCCD1A6NED2 376 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 USP2O75604 605 aaPredicted RBP15.61■□□□□ 0.09
CLCN4-201ENST00000380829 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
CLCN4-201ENST00000380829 LIG3P49916 1009 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 KRT83P78385 493 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 CDK17Q00537 523 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 UGCGQ16739 394 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 DCAF17Q5H9S7 520 aaPredicted RBP15.61■□□□□ 0.09
CLCN4-201ENST00000380829 CCDC122Q5T0U0 273 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 DAW1Q8N136 415 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 HNRNPLLQ8WVV9 542 aaKnown RBP15.61■□□□□ 0.09
CLCN4-201ENST00000380829 TBC1D22BQ9NU19 505 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 FAM184BQ9ULE4 1060 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 ODF2LQ9ULJ1 636 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 ADAMTS5Q9UNA0 930 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 PCDHB13Q9Y5F0 798 aa15.61■□□□□ 0.09
CLCN4-201ENST00000380829 LRRIQ3A6PVS8 624 aaPredicted RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 ADM5C9JUS6 153 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 ZNF263O14978 683 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 EIF3DO15371 548 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 IPO7O95373 1038 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 QARSP47897 775 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 POLR2FP61218 127 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 VGLL4Q14135 290 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 HSP90B2PQ58FF3 399 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 PDXDC1Q6P996 788 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 ZNF720Q7Z2F6 126 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 FRMD5Q7Z6J6 570 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 LACRTQ9GZZ8 138 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 KCND2Q9NZV8 630 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 CLGNO14967 610 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 PEX10O60683 326 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 CCNE2O96020 404 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 NR3C2P08235 984 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 RPL13P26373 211 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 EIF4A3P38919 411 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 MAPK7Q13164 816 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 NOL9Q5SY16 702 aaKnown RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 TCERG1LQ5VWI1 586 aa15.6■□□□□ 0.09
CLCN4-201ENST00000380829 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.6■□□□□ 0.09
CLCN4-201ENST00000380829 JAKMIP2Q96AA8 810 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms