RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 BRDTQ58F21 947 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 ZNF354CQ86Y25 554 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.71□□□□□ -0.211e-8■■■■■ 66.3
DNMT3A-204ENST00000380756 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 RASA1P20936 1047 aa13.71□□□□□ -0.22
DNMT3A-204ENST00000380756 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.22
DNMT3A-204ENST00000380756 XXYLT1Q8NBI6 393 aa13.71□□□□□ -0.22
DNMT3A-204ENST00000380756 CNKSR1Q969H4 720 aa13.71□□□□□ -0.22
DNMT3A-204ENST00000380756 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.22
DNMT3A-204ENST00000380756 PLEKP08567 350 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 PMS2P54278 862 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 PEX3P56589 373 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 BSPRYQ5W0U4 402 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 SCYL2Q6P3W7 929 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 CFAP57Q96MR6 1250 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 DUSP10Q9Y6W6 482 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 PDXKO00764 312 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 TBX2Q13207 712 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 ARHGAP27Q6ZUM4 889 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 GBP7Q8N8V2 638 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 SEPT9Q9UHD8 586 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 F5H6K3 240 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 H3BQF6 201 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 FTLP02792 175 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 UCHL3P15374 230 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 FGFR2P21802 821 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 CA4P22748 312 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 YWHAGP61981 247 aaKnown RBP eCLIP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 KLRC3Q07444 240 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF746Q6NUN9 644 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 CNOT8Q9UFF9 292 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 ANAPC7Q9UJX3 599 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 MEGF6O75095 1541 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 EVI5O60447 810 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 KLRC1P26715 233 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 KCND1Q9NSA2 647 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 SEL1LQ9UBV2 794 aa13.7□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM187AA6NFU0 413 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 TNNC2P02585 160 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 INHBAP08476 426 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 P4HA1P13674 534 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PSMC4P43686 418 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 DYDC2Q96IM9 177 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 RIOK1Q9BRS2 568 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 LRRIQ3A6PVS8 624 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 CHRNA3P32297 505 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ARL1P40616 181 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF543Q08ER8 600 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 KRT81Q14533 505 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ZIM3Q96PE6 472 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 CCT8L2Q96SF2 557 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PRDM4Q9UKN5 801 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ACTN1P12814 892 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PKN1Q16512 942 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 ANKZF1Q9H8Y5 726 aa13.69□□□□□ -0.22
DNMT3A-204ENST00000380756 NPHP3-ACAD11A0A0J9YXS1 232 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CRKP46108 304 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PRELPP51888 382 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PPP2R5AQ15172 486 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 NBPF9Q3BBW0 867 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PAPD7Q5XG87 772 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CFAP61Q8NHU2 1237 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 HVCN1Q96D96 273 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 EPN3Q9H201 632 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 SPON1Q9HCB6 807 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 LRRD1A4D1F6 860 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 TXNDC9O14530 226 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 KRT1P04264 644 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 SOX5P35711 763 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PRKG1Q13976 671 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms