RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SEPT14Q6ZU15 432 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ACRBPQ8NEB7 543 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ZNF408Q9H9D4 720 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 DNAI1Q9UI46 699 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 EPN1Q9Y6I3 576 aaPredicted RBP21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 MCM3APO60318 1980 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 A0A0U1RQJ8 604 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 SLC25A27O95847 323 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 PLS3P13797 630 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 GTF2F1P35269 517 aaKnown RBP eCLIP21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ABHD15Q6UXT9 468 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 FAM133AQ8N9E0 248 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ATRIPQ8WXE1 791 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ATP6V0A1Q93050 837 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 TIPINQ9BVW5 301 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 ZNHIT6Q9NWK9 470 aaKnown RBP21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 K7ENM7 598 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 SLC16A3O15427 465 aaKnown RBP21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 MAPTP10636 758 aaKnown RBP21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 NFIL3Q16649 462 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 OTUD6AQ7L8S5 288 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 NEK11Q8NG66 645 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 GBP3Q9H0R5 595 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 LZTFL1Q9NQ48 299 aa21.81■■□□□ 1.08
PDLIM5-205ENST00000380180 STBD1O95210 358 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 NDUFA10O95299 355 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 EPB41P11171 864 aaKnown RBP21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 EDNRBP24530 442 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 SNAPC2Q13487 334 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 CYFIP1Q7L576 1253 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 CCDC60Q8IWA6 550 aaPredicted RBP21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 DRC1Q96MC2 740 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 CRACR2AQ9BSW2 395 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 METTL14Q9HCE5 456 aaKnown RBP21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 GPRC5CQ9NQ84 441 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 LRRC37A2A6NM11 1700 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 DKC1O60832 514 aaKnown RBP eCLIP21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 HS2ST1Q7LGA3 356 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 AGPAT3Q9NRZ7 376 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 PLAGL2Q9UPG8 496 aa21.8■■□□□ 1.08
PDLIM5-205ENST00000380180 PHLPP2Q6ZVD8 1323 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 FANCGO15287 622 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 XRCC5P13010 732 aaKnown RBP21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 PPP2R3AQ06190 1150 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 FAM102BQ5T8I3 360 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 MIS18BP1Q6P0N0 1132 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 SYCP3Q8IZU3 236 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 CEP170P1Q96L14 293 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 NOL4O94818 638 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 HNRNPH3P31942 346 aaKnown RBP21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 CDK17Q00537 523 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 BAP1Q92560 729 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 EDEM3Q9BZQ6 932 aa21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 NHEJ1Q9H9Q4 299 aaPredicted RBP21.79■■□□□ 1.08
PDLIM5-205ENST00000380180 AFPP02771 609 aaKnown RBP21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 PGK2P07205 417 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 SUPT20HL2P0C7V6 817 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 PSMC2P35998 433 aaKnown RBP21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 PEX3P56589 373 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 GNG11P61952 73 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 ALCAMQ13740 583 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 RRAGAQ7L523 313 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 BORCS6Q96GS4 357 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 LSM14BQ9BX40 385 aaKnown RBP21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 IRX2Q9BZI1 471 aaPredicted RBP21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 DMAC2Q9NW81 257 aa21.78■■□□□ 1.08
PDLIM5-205ENST00000380180 LRRC53A6NM62 1247 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 DYNC1I1O14576 645 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 ATG7O95352 703 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 COPB2P35606 906 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 DCAF17Q5H9S7 520 aaPredicted RBP21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 CACNA2D4Q7Z3S7 1137 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 HAUS6Q7Z4H7 955 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 GOLGA5Q8TBA6 731 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 WDR24Q96S15 920 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 REXO2Q9Y3B8 237 aaKnown RBP21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 SYNGAP1Q96PV0 1343 aa21.77■■□□□ 1.08
PDLIM5-205ENST00000380180 PRKCEQ02156 737 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 TCERG1LQ5VWI1 586 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 FAM186BQ8IYM0 893 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 SLC35C1Q96A29 364 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 ST6GALNAC4Q9H4F1 302 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 TMEM206Q9H813 350 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 CEP72Q9P209 647 aa21.77■■□□□ 1.07
PDLIM5-205ENST00000380180 UNCXA6NJT0 531 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 SLC16A4O15374 487 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 UBA1P22314 1058 aaKnown RBP21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 CYP2J2P51589 502 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 GTF2BQ00403 316 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 APBA1Q02410 837 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 EEPD1Q7L9B9 569 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 CCDC170Q8IYT3 715 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 ZNF526Q8TF50 670 aaPredicted RBP21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 TSC1Q92574 1164 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 ACCSQ96QU6 501 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 MKNK1Q9BUB5 465 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 NLRC4Q9NPP4 1024 aa21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 SEPT9Q9UHD8 586 aaPredicted RBP21.76■■□□□ 1.07
PDLIM5-205ENST00000380180 IGSF9BQ9UPX0 1349 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms