RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 ZNF543Q08ER8 600 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 IFI16Q16666 785 aaKnown RBP10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 KNOP1Q1ED39 458 aaKnown RBP10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 ASPRV1Q53RT3 343 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 DCAF17Q5H9S7 520 aaPredicted RBP10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 H2AFVQ71UI9 128 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 PTF1AQ7RTS3 328 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 PIGWQ7Z7B1 504 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 CATSPER3Q86XQ3 398 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 ZDHHC14Q8IZN3 488 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 SLC35G2Q8TBE7 412 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 N4BP2L2Q92802 583 aaPredicted RBP10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 ARHGEF26Q96DR7 871 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 FMO2Q99518 471 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 REEP2Q9BRK0 252 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 FAM114A2Q9NRY5 505 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 COG5Q9UP83 839 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 NCANO14594 1321 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L15C9J2P7 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L13C9JLJ4 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L11C9JVI0 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L18D6R9N7 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L22D6RA61 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L17D6RBQ6 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L19D6RCP7 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L20D6RJB6 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 MEIS1O00470 390 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 FLOT1O75955 427 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 GFPT2O94808 682 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 NUDT17P0C025 328 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 SPATA31C1P0DKV0 1188 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 GABPAQ06546 454 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L24Q0WX57 530 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 USP17L6PQ6QN14 398 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 PALB2Q86YC2 1186 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ALG3Q92685 438 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ZHX3Q9H4I2 956 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ANKIB1Q9P2G1 1089 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CCT8L1PA6NM43 557 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CTNND1O60716 968 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 TRIM37O94972 964 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 PLS1Q14651 629 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 E2F5Q15329 346 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ACCSLQ4AC99 568 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CPLX4Q7Z7G2 160 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 GLYCTKQ8IVS8 523 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CCDC26Q8TAB7 109 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 SCLT1Q96NL6 688 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 TACO1Q9BSH4 297 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 TAS2R14Q9NYV8 317 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 GRHL1Q9NZI5 618 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 GCNT4Q9P109 453 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 INTUQ9ULD6 942 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ODF2LQ9ULJ1 636 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 UTP11Q9Y3A2 253 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 PCDHA3Q9Y5H8 950 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 EVI5O60447 810 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ATP6V1G2O95670 118 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 SLURP2P0DP57 97 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 RDXP35241 583 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CDR1P51861 262 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 ARMC9Q7Z3E5 817 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 CUL5Q93034 780 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 AGAP1Q9UPQ3 857 aa10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 RTCBQ9Y3I0 505 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-202ENST00000379600 SPDYE3A6NKU9 549 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 UBAP1LF5GYI3 381 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 NR3C1P04150 777 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 ANXA13P27216 316 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 PTGIRP43119 386 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 MRPL12P52815 198 aaKnown RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 SPDYCQ5MJ68 293 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 LRRC34Q8IZ02 419 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 CRYGNQ8WXF5 182 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 MBOAT7Q96N66 472 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 SETDB2Q96T68 719 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 ERP44Q9BS26 406 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 CNOT10Q9H9A5 744 aaKnown RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 MMEP08473 750 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 DR1Q01658 176 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 PABPC4Q13310 644 aaKnown RBP eCLIP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 DPP8Q6V1X1 898 aaPredicted RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 FBXO25Q8TCJ0 367 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 PGM2Q96G03 612 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 NYXQ9GZU5 481 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 PABPC3Q9H361 631 aaKnown RBP10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 AZI2Q9H6S1 392 aa10.16□□□□□ -0.78
NHLRC3-202ENST00000379600 PSTPIP2Q9H939 334 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms