RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 BEST2Q8NFU1 509 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 SUGT1Q9Y2Z0 365 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 MED7O43513 233 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ZMYND10O75800 440 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 AKR1B1P15121 316 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 RBBP5Q15291 538 aaKnown RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 ATP6V0A4Q9HBG4 840 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
HIF3A-205ENST00000377670 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
HIF3A-205ENST00000377670 MAPK6Q16659 721 aa11.65□□□□□ -0.55
HIF3A-205ENST00000377670 CCDC157Q569K6 752 aa11.65□□□□□ -0.55
HIF3A-205ENST00000377670 RINT1Q6NUQ1 792 aa11.65□□□□□ -0.55
HIF3A-205ENST00000377670 TMED8Q6PL24 325 aaPredicted RBP11.65□□□□□ -0.55
HIF3A-205ENST00000377670 CCDC84Q86UT8 332 aaPredicted RBP11.65□□□□□ -0.55
HIF3A-205ENST00000377670 TMEM206Q9H813 350 aa11.65□□□□□ -0.55
HIF3A-205ENST00000377670 SLC4A7Q9Y6M7 1214 aa11.65□□□□□ -0.55
HIF3A-205ENST00000377670 ENC1O14682 589 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 PFDN1O60925 122 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 LGSNQ5TDP6 509 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 U2AF1L4Q8WU68 220 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 THAP12O43422 761 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 CASP14P31944 242 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 HNRNPH2P55795 449 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 POLR2FP61218 127 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 IER5Q5VY09 327 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 SLFN12LQ6IEE8 588 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 MAIP1Q8WWC4 291 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 EPB41L4AQ9HCS5 686 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 SLC25A27O95847 323 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 CLCN6P51797 869 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 GUCY2DQ02846 1103 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 BTBD8Q5XKL5 378 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 ADAT2Q7Z6V5 191 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 PSPC1Q8WXF1 523 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 PCIF1Q9H4Z3 704 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 MST1RQ04912 1400 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 RASSF7Q02833 373 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 CTTNQ14247 550 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 HAUS6Q7Z4H7 955 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 RHPN2Q8IUC4 686 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 HEXIM2Q96MH2 286 aaKnown RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 FAF1Q9UNN5 650 aaPredicted RBP11.64□□□□□ -0.55
HIF3A-205ENST00000377670 GDAQ9Y2T3 454 aa11.64□□□□□ -0.55
HIF3A-205ENST00000377670 A0A087WUV0 522 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 FOXN1O15353 648 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 TADA2AO75478 443 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 TRPA1O75762 1119 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 NSFP46459 744 aaKnown RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MFAP3P55082 362 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 ACCSLQ4AC99 568 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 GH1P01241 217 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 AGBL3Q8NEM8 1001 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CFAP61Q8NHU2 1237 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CNOT6LQ96LI5 555 aaKnown RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 HTATIP2Q9BUP3 242 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MFSD1Q9H3U5 465 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MOCS3O95396 460 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 STAG3L1P0CL83 205 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 ARL13BQ3SXY8 428 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 PIGOQ8TEQ8 1089 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 PCDHB7Q9Y5E2 793 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 SRPRBQ9Y5M8 271 aaKnown RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CPT1AP50416 773 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 PAGE5Q96GU1 130 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MAGED2Q9UNF1 606 aaPredicted RBP11.63□□□□□ -0.55
HIF3A-205ENST00000377670 UTYO14607 1347 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CYBBP04839 570 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 SLFN14P0C7P3 912 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 MYL7Q01449 175 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CAPN12Q6ZSI9 719 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 CCDC197Q8NCU1 140 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 STRIP2Q9ULQ0 834 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 HPCAL4Q9UM19 191 aa11.63□□□□□ -0.55
HIF3A-205ENST00000377670 WTIPA6NIX2 430 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-205ENST00000377670 PRRG1O14668 218 aa11.62□□□□□ -0.55
HIF3A-205ENST00000377670 RAG1P15918 1043 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms