RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 LENG9Q96B70 501 aa15.08■□□□□ 0
SF1-205ENST00000377394 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
SF1-205ENST00000377394 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 MEIS1O00470 390 aa15.07■□□□□ 0
SF1-205ENST00000377394 MYBP10242 640 aa15.07■□□□□ 0
SF1-205ENST00000377394 UCHL3P15374 230 aa15.07■□□□□ 0
SF1-205ENST00000377394 ARHGAP4P98171 946 aa15.07■□□□□ 0
SF1-205ENST00000377394 PAK2Q13177 524 aa15.07■□□□□ 0
SF1-205ENST00000377394 DRP2Q13474 957 aa15.07■□□□□ 0
SF1-205ENST00000377394 KNOP1Q1ED39 458 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 HHIPL2Q6UWX4 724 aa15.07■□□□□ 0
SF1-205ENST00000377394 MREGQ8N565 214 aa15.07■□□□□ 0
SF1-205ENST00000377394 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
SF1-205ENST00000377394 USP38Q8NB14 1042 aa15.07■□□□□ 0
SF1-205ENST00000377394 SPDL1Q96EA4 605 aa15.07■□□□□ 0
SF1-205ENST00000377394 CCDC17Q96LX7 622 aa15.07■□□□□ 0
SF1-205ENST00000377394 REEP2Q9BRK0 252 aa15.07■□□□□ 0
SF1-205ENST00000377394 ARMCX3Q9UH62 379 aaPredicted RBP15.07■□□□□ 0
SF1-205ENST00000377394 USP21Q9UK80 565 aa15.07■□□□□ 0
SF1-205ENST00000377394 CLSTN1O94985 981 aa15.07■□□□□ 0
SF1-205ENST00000377394 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 PON1P27169 355 aa15.07■□□□□ 0
SF1-205ENST00000377394 MYO1EQ12965 1108 aa15.07■□□□□ 0
SF1-205ENST00000377394 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 03e-10■■■■■ 38.5
SF1-205ENST00000377394 AP3B2Q13367 1082 aa15.07■□□□□ 0
SF1-205ENST00000377394 Q4G0T1 1027 aa15.07■□□□□ 0
SF1-205ENST00000377394 PRR16Q569H4 304 aa15.07■□□□□ 0
SF1-205ENST00000377394 C10orf76Q5T2E6 689 aa15.07■□□□□ 0
SF1-205ENST00000377394 SFR1Q86XK3 245 aa15.07■□□□□ 0
SF1-205ENST00000377394 RBM46Q8TBY0 533 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 DCAF4Q8WV16 495 aa15.07■□□□□ 0
SF1-205ENST00000377394 GGA2Q9UJY4 613 aa15.07■□□□□ 0
SF1-205ENST00000377394 GMNCA6NCL1 334 aa15.07■□□□□ 0
SF1-205ENST00000377394 CES2O00748 559 aa15.07■□□□□ 0
SF1-205ENST00000377394 RPA1P27694 616 aa15.07■□□□□ 0
SF1-205ENST00000377394 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
SF1-205ENST00000377394 EMC10Q5UCC4 262 aa15.07■□□□□ 0
SF1-205ENST00000377394 SLFN13Q68D06 897 aa15.07■□□□□ 0
SF1-205ENST00000377394 CHADLQ6NUI6 762 aa15.07■□□□□ 0
SF1-205ENST00000377394 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
SF1-205ENST00000377394 SEC16BQ96JE7 1060 aa15.07■□□□□ 0
SF1-205ENST00000377394 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
SF1-205ENST00000377394 PLAAQ9Y263 795 aa15.07■□□□□ 0
SF1-205ENST00000377394 RAD51CO43502 376 aa15.06■□□□□ 0
SF1-205ENST00000377394 AKAP3O75969 853 aa15.06■□□□□ 0
SF1-205ENST00000377394 DOK7Q18PE1 504 aa15.06■□□□□ 0
SF1-205ENST00000377394 LRRC57Q8N9N7 239 aa15.06■□□□□ 0
SF1-205ENST00000377394 MAGEC3Q8TD91 643 aa15.06■□□□□ 0
SF1-205ENST00000377394 NSMCE1Q8WV22 266 aa15.06■□□□□ 0
SF1-205ENST00000377394 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
SF1-205ENST00000377394 NENFQ9UMX5 172 aa15.06■□□□□ 0
SF1-205ENST00000377394 DNM3Q9UQ16 869 aa15.06■□□□□ 0
SF1-205ENST00000377394 FAM196BA6NMK8 535 aa15.06■□□□□ 0
SF1-205ENST00000377394 FAM86B1E9PN63 330 aa15.06■□□□□ 0
SF1-205ENST00000377394 PDXKO00764 312 aa15.06■□□□□ 0
SF1-205ENST00000377394 TBX3O15119 743 aa15.06■□□□□ 0
SF1-205ENST00000377394 RAD21O60216 631 aa15.06■□□□□ 0
SF1-205ENST00000377394 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
SF1-205ENST00000377394 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
SF1-205ENST00000377394 EPHA7Q15375 998 aa15.06■□□□□ 0
SF1-205ENST00000377394 CCDC50Q8IVM0 306 aa15.06■□□□□ 0
SF1-205ENST00000377394 TEKT1Q969V4 418 aa15.06■□□□□ 0
SF1-205ENST00000377394 NOD2Q9HC29 1040 aa15.06■□□□□ 0
SF1-205ENST00000377394 NYAP2Q9P242 653 aa15.06■□□□□ 0
SF1-205ENST00000377394 NAGPAQ9UK23 515 aa15.06■□□□□ 0
SF1-205ENST00000377394 L3MBTL1Q9Y468 752 aa15.06■□□□□ 0
SF1-205ENST00000377394 BZW2Q9Y6E2 419 aaKnown RBP15.06■□□□□ 0
SF1-205ENST00000377394 ATP6V1G2O95670 118 aa15.05■□□□□ 0
SF1-205ENST00000377394 PRKCIP41743 596 aa15.05■□□□□ 0
SF1-205ENST00000377394 RPS6KA1Q15418 735 aa15.05■□□□□ 0
SF1-205ENST00000377394 EXOC3L4Q17RC7 722 aa15.05■□□□□ 0
SF1-205ENST00000377394 BMT2Q1RMZ1 405 aa15.05■□□□□ 0
SF1-205ENST00000377394 DNAAF5Q86Y56 855 aa15.05■□□□□ 0
SF1-205ENST00000377394 ARMC2Q8NEN0 867 aa15.05■□□□□ 0
SF1-205ENST00000377394 LMBR1Q8WVP7 490 aa15.05■□□□□ 0
SF1-205ENST00000377394 SPAG5Q96R06 1193 aa15.05■□□□□ 0
SF1-205ENST00000377394 BCAS3Q9H6U6 928 aa15.05■□□□□ 0
SF1-205ENST00000377394 SIX2Q9NPC8 291 aa15.05■□□□□ 0
SF1-205ENST00000377394 AJAP1Q9UKB5 411 aaPredicted RBP15.05■□□□□ 0
SF1-205ENST00000377394 ENO4A6NNW6 628 aa15.05■□□□□ -0
SF1-205ENST00000377394 PHF20L1A8MW92 1017 aa15.05■□□□□ -0
SF1-205ENST00000377394 KCNK3O14649 394 aa15.05■□□□□ -0
SF1-205ENST00000377394 MGRN1O60291 552 aa15.05■□□□□ -0
SF1-205ENST00000377394 KIF4AO95239 1232 aa15.05■□□□□ -0
SF1-205ENST00000377394 CALRP27797 417 aaKnown RBP15.05■□□□□ -0
SF1-205ENST00000377394 SLC8A1P32418 973 aa15.05■□□□□ -0
SF1-205ENST00000377394 SNAP25P60880 206 aa15.05■□□□□ -0
SF1-205ENST00000377394 ELF3P78545 371 aaPredicted RBP15.05■□□□□ -0
SF1-205ENST00000377394 ZKSCAN8Q15776 578 aaPredicted RBP15.05■□□□□ -0
SF1-205ENST00000377394 HIBCHQ6NVY1 386 aaPredicted RBP15.05■□□□□ -0
SF1-205ENST00000377394 CD302Q8IX05 232 aa15.05■□□□□ -0
SF1-205ENST00000377394 ERMNQ8TAM6 284 aa15.05■□□□□ -0
SF1-205ENST00000377394 PARD3BQ8TEW8 1205 aa15.05■□□□□ -0
SF1-205ENST00000377394 GOLPH3Q9H4A6 298 aa15.05■□□□□ -0
SF1-205ENST00000377394 RSPH10B2B2RC85 870 aa15.04■□□□□ -0
SF1-205ENST00000377394 RSPH10BP0C881 870 aa15.04■□□□□ -0
SF1-205ENST00000377394 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
SF1-205ENST00000377394 XRCC4Q13426 336 aa15.04■□□□□ -0
SF1-205ENST00000377394 WHAMMQ8TF30 809 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms