RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SPDYE16A6NNV3 312 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 FKTNO75072 461 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 ATP1A3P13637 1013 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 RAG1P15918 1043 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 KLRC1P26715 233 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PRCPP42785 496 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PDIA5Q14554 519 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PPP2R5DQ14738 602 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 TMEM132BQ14DG7 1078 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 EMC2Q15006 297 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 CYP26C1Q6V0L0 522 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 MICALL1Q8N3F8 863 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 DESI2Q9BSY9 194 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 AOC2O75106 756 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 NR3C1P04150 777 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 TRIM49P0CI25 452 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 TRIM49CP0CI26 452 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 ZC2HC1CQ53FD0 456 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 SPRYD7Q5W111 196 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 GPRASP2Q96D09 838 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 C2orf40Q9H1Z8 148 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 SLC38A10Q9HBR0 1119 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 LRRC4Q9HBW1 653 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 BCCIPQ9P287 314 aaKnown RBP eCLIP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PRG3Q9Y2Y8 225 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 MYPNQ86TC9 1320 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 MAGEB2O15479 319 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 VTNP04004 478 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 PPP2R3AQ06190 1150 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 CATSPER3Q86XQ3 398 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 C17orf53Q8N3J3 647 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TRAPPC12Q8WVT3 735 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TUBE1Q9UJT0 475 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 AGO2Q9UKV8 859 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 ESYT2A0FGR8 921 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 GFPT2O94808 682 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 NSFP46459 744 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 MFAP3P55082 362 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 PSMD2Q13200 908 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 ACVR2BQ13705 512 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TRIM14Q14142 442 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 SEZ6Q53EL9 994 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 SYT10Q6XYQ8 523 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TLK2Q86UE8 772 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 SMAP1Q8IYB5 467 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 PCSK9Q8NBP7 692 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 REEP2Q9BRK0 252 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 WDR18Q9BV38 432 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 IFIH1Q9BYX4 1025 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 UNC45AQ9H3U1 944 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 FBXO2Q9UK22 296 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 V9GYY5 206 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 MAP1BP46821 2468 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 MYL1P05976 194 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 CD99L2Q8TCZ2 262 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TINF2Q9BSI4 451 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 KLRG2A4D1S0 409 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 CTAGE9A4FU28 777 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TMEM150BA6NC51 233 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 HUS1O60921 280 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 LDHAP00338 332 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 AKR1A1P14550 325 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 CIITAP33076 1130 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 ALDH5A1P51649 535 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 SOX10P56693 466 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 PGM5Q15124 567 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 NTRK3Q16288 839 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 MAN2A1Q16706 1144 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 KNOP1Q1ED39 458 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 GPR142Q7Z601 462 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 CCDC25Q86WR0 208 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 TUFT1Q9NNX1 390 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 RBAKQ9NYW8 714 aaPredicted RBP9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 KLK14Q9P0G3 267 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 MTUS1Q9ULD2 1270 aa9.19□□□□□ -0.94
CRNKL1-202ENST00000377340 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 TBC1D12O60347 775 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF280AP59817 542 aaPredicted RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF445P59923 1031 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PKN1Q16512 942 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PAN2Q504Q3 1202 aaKnown RBP9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 XRRA1Q6P2D8 792 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 TRIM9Q9C026 710 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PORCNQ9H237 461 aa9.18□□□□□ -0.94
CRNKL1-202ENST00000377340 PLEKHA4Q9H4M7 779 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms