RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 SIK3Q9Y2K2 1263 aa14.21□□□□□ -0.13
TRIM40-206ENST00000376724 MYH11P35749 1972 aa14.21□□□□□ -0.13
TRIM40-206ENST00000376724 EPHB6O15197 1021 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 CETPP11597 493 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 PLS3P13797 630 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 UBA1P22314 1058 aaKnown RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 EDNRBP24530 442 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 MARSP56192 900 aaKnown RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 PEX3P56589 373 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 PRKCEQ02156 737 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 TMTC1Q8IUR5 882 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 C2orf69Q8N8R5 385 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 ZNF526Q8TF50 670 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 CRACR2AQ9BSW2 395 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 PORCNQ9H237 461 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 ARMCX3Q9UH62 379 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 BTBD19C9JJ37 291 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 DKC1O60832 514 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 SUPT20HL2P0C7V6 817 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 EPB41P11171 864 aaKnown RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 COPB2P35606 906 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 GTF2A2P52657 109 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 SOX10P56693 466 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 DCAF17Q5H9S7 520 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 TCERG1LQ5VWI1 586 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 ZNF397Q8NF99 534 aaPredicted RBP14.2□□□□□ -0.14
TRIM40-206ENST00000376724 MS4A4AQ96JQ5 239 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 DNAJC7Q99615 494 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 GBP3Q9H0R5 595 aa14.2□□□□□ -0.14
TRIM40-206ENST00000376724 SLC16A4O15374 487 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 STBD1O95210 358 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 CCDC175P0C221 793 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 CYP2J2P51589 502 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 ZBED6P86452 979 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 KCNMA1Q12791 1236 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 FRMD5Q7Z6J6 570 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 GPIHBP1Q8IV16 184 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
TRIM40-206ENST00000376724 MROH8Q9H579 483 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 ZNF302Q9NR11 478 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 UBE4BO95155 1302 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 UNCXA6NJT0 531 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
TRIM40-206ENST00000376724 FECHP22830 423 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 MTERF2Q49AM1 385 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 WDR59Q6PJI9 974 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 HAUS6Q7Z4H7 955 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 ACRBPQ8NEB7 543 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 GPRC5AQ8NFJ5 357 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 BRI3BPQ8WY22 251 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 PRIMPOLQ96LW4 560 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 FGD4Q96M96 766 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 STRA6Q9BX79 667 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 AGPAT3Q9NRZ7 376 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 ZNHIT6Q9NWK9 470 aaKnown RBP14.19□□□□□ -0.14
TRIM40-206ENST00000376724 ADGRG1Q9Y653 693 aa14.19□□□□□ -0.14
TRIM40-206ENST00000376724 SYNGAP1Q96PV0 1343 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 UQCRHLA0A096LP55 91 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 PPP1R37O75864 691 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 FARP2O94887 1054 aaPredicted RBP14.18□□□□□ -0.14
TRIM40-206ENST00000376724 GGPS1O95749 300 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 UQCRHP07919 91 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 FIGNQ5HY92 759 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 KIFC3Q9BVG8 833 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 TIPINQ9BVW5 301 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 LSM14BQ9BX40 385 aaKnown RBP14.18□□□□□ -0.14
TRIM40-206ENST00000376724 MLXIPQ9HAP2 919 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 NMRK2Q9NPI5 230 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 LZTFL1Q9NQ48 299 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
TRIM40-206ENST00000376724 DNAJC25-GNG10A0A024R161 153 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 A0A1W2PQJ5 194 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 TISP43B9A030 160 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 KIF2AO00139 706 aaPredicted RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 SOCS7O14512 581 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 SLC16A3O15427 465 aaKnown RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 PSMC2P35998 433 aaKnown RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 FKBP1BP68106 108 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 APBA1Q02410 837 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 NEDD9Q14511 834 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 FBXO16Q8IX29 292 aaPredicted RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 FAM186BQ8IYM0 893 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 KIF18AQ8NI77 898 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 PCIF1Q9H4Z3 704 aa14.17□□□□□ -0.14
TRIM40-206ENST00000376724 METTL14Q9HCE5 456 aaKnown RBP14.17□□□□□ -0.14
TRIM40-206ENST00000376724 NLRC4Q9NPP4 1024 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms