RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 XPO6Q96QU8 1125 aaKnown RBP13.21□□□□□ -0.29
C9orf3-203ENST00000375315 CNOT8Q9UFF9 292 aaKnown RBP13.21□□□□□ -0.29
C9orf3-203ENST00000375315 ASAP2O43150 1006 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 KRT2P35908 639 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 TNNC1P63316 161 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 MRPS35P82673 323 aaKnown RBP13.21□□□□□ -0.3
C9orf3-203ENST00000375315 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.3
C9orf3-203ENST00000375315 ATP11AP98196 1134 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 DGKZQ13574 1117 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 TRPM8Q7Z2W7 1104 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 CENPTQ96BT3 561 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 KRT12Q99456 494 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 GORASP1Q9BQQ3 440 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 MYOZ2Q9NPC6 264 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 CNOT7Q9UIV1 285 aaKnown RBP13.21□□□□□ -0.3
C9orf3-203ENST00000375315 NRXN2Q9P2S2 1712 aa13.21□□□□□ -0.3
C9orf3-203ENST00000375315 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 NCK2O43639 380 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 TTLL1O95922 423 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 CCNG1P51959 295 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 TRIM4Q9C037 500 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 H0YGN5 161 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 RNF8O76064 485 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 NPTXRO95502 500 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 SLC1A4P43007 532 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 KRT26Q7Z3Y9 468 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 MS4A14Q96JA4 679 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 EXOC1Q9NV70 894 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
C9orf3-203ENST00000375315 NFS1Q9Y697 457 aa13.2□□□□□ -0.3
C9orf3-203ENST00000375315 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 CUL1Q13616 776 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 RASA3Q14644 834 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 USH1GQ495M9 461 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 HHATQ5VTY9 493 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 DTNBP1Q96EV8 351 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 ZNF263O14978 683 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 IMPDH2P12268 514 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 ALDH3A1P30838 453 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 MAGEA8P43361 318 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 GRM4Q14833 912 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 SDCCAG8Q86SQ7 713 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 STAMQ92783 540 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 PLIN2Q99541 437 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 ISCUQ9H1K1 167 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 FLOT1O75955 427 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 INF2Q27J81 1249 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
C9orf3-203ENST00000375315 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
C9orf3-203ENST00000375315 AKR1B10O60218 316 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 BMP15O95972 392 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 ZNF131P52739 623 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 KCNJ2P63252 427 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 TRIM68Q6AZZ1 485 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 MYH1P12882 1939 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-203ENST00000375315 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
C9orf3-203ENST00000375315 LBRQ14739 615 aaKnown RBP13.18□□□□□ -0.3
C9orf3-203ENST00000375315 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 BICD1Q96G01 975 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
C9orf3-203ENST00000375315 GMLQ99445 158 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
C9orf3-203ENST00000375315 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms