RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 HNF1BP35680 557 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 ATP2B2Q01814 1243 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 HLTFQ14527 1009 aaKnown RBP eCLIP9.86□□□□□ -0.831e-10■□□□□ 9.6
UBR4-201ENST00000375218 PPP2R5EQ16537 467 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 USPL1Q5W0Q7 1092 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 INTS3Q68E01 1043 aaKnown RBP9.86□□□□□ -0.83
UBR4-201ENST00000375218 ACMSDQ8TDX5 336 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 MTMR12Q9C0I1 747 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 ARAP2Q8WZ64 1704 aa9.86□□□□□ -0.83
UBR4-201ENST00000375218 PNMA6EA0A0J9YXQ4 647 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 ZSCAN5CA6NGD5 496 aaPredicted RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 EYA2O00167 538 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 DIAPH2O60879 1101 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 KCNJ13O60928 360 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 HOXC12P31275 282 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 CLPPQ16740 277 aaPredicted RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 PPP1R21Q6ZMI0 780 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 NUP93Q8N1F7 819 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 BRD8Q9H0E9 1235 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 NDFIP2Q9NV92 336 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 DUSP12Q9UNI6 340 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 MAPK8IP1Q9UQF2 711 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 GPR182O15218 404 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 RNMTO43148 476 aaKnown RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 SLC39A6Q13433 755 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 CEP135Q66GS9 1140 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 NUP54Q7Z3B4 507 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 TMC6Q7Z403 805 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 ZNF619Q8N2I2 560 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 NKAPQ8N5F7 415 aaKnown RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 ERMNQ8TAM6 284 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 MYLK2Q9H1R3 596 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 TOPORSQ9NS56 1045 aaPredicted RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 GPR34Q9UPC5 381 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 DAGLAQ9Y4D2 1042 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
UBR4-201ENST00000375218 B4DLN1 442 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 ACSL4O60488 711 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 NEMFO60524 1076 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 PF4V1P10720 104 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 SFTPCP11686 197 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 MPSTP25325 297 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 MIPOL1Q8TD10 442 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 FAM184BQ9ULE4 1060 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.85□□□□□ -0.832e-9■□□□□ 9.6
UBR4-201ENST00000375218 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 LETM2Q2VYF4 491 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 FAM205BPQ63HN1 556 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 GATAD2AQ86YP4 633 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 AGR3Q8TD06 166 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 RNF139Q8WU17 664 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 MPHOSPH8Q99549 860 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 DACT1Q9NYF0 836 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 SCN7AQ01118 1682 aa9.85□□□□□ -0.83
UBR4-201ENST00000375218 NPHP3Q7Z494 1330 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 TISP43B9A030 160 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 B9A039 149 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 UBXN8O00124 270 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 EOMESO95936 686 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 MSNP26038 577 aaKnown RBP9.84□□□□□ -0.83
UBR4-201ENST00000375218 USP11P51784 963 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 NLRP5P59047 1200 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 PDIA5Q14554 519 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 GPR162Q16538 588 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 FAM173BQ6P4H8 233 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 CASP10Q92851 521 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 MTMR9Q96QG7 549 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 USP44Q9H0E7 712 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 HPF1Q9NWY4 346 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 ZSWIM5Q9P217 1185 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 PPT2Q9UMR5 302 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 CARD8Q9Y2G2 431 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 LTBP1Q14766 1721 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 A0A087X0B3 334 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 IGKV5-2P06315 115 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 ENDOUP21128 410 aaKnown RBP9.84□□□□□ -0.83
UBR4-201ENST00000375218 CASP7P55210 303 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 GALEQ14376 348 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 SUZ12Q15022 739 aaKnown RBP9.84□□□□□ -0.83
UBR4-201ENST00000375218 POTEEQ6S8J3 1075 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 DHX58Q96C10 678 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 LRRC45Q96CN5 670 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 FERD3LQ96RJ6 166 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 RMDN3Q96TC7 470 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 ABCB6Q9NP58 842 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 ARHGAP28Q9P2N2 729 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 MALT1Q9UDY8 824 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 HOXC11O43248 304 aaPredicted RBP9.84□□□□□ -0.83
UBR4-201ENST00000375218 OPA1O60313 960 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 STMN1P16949 149 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 HNF4AP41235 474 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 DGKGP49619 791 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 CPT1AP50416 773 aa9.84□□□□□ -0.83
UBR4-201ENST00000375218 BLVRAP53004 296 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms