RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KIF5CO60282 957 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SLU7O95391 586 aaKnown RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 AFPP02771 609 aaKnown RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 XRCC5P13010 732 aaKnown RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 CASQ1P31415 396 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 KRT83P78385 493 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ARHGAP29Q52LW3 1261 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 PDXDC1Q6P996 788 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ANKRD35Q8N283 1001 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SLC17A8Q8NDX2 589 aa19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 SYN2Q92777 582 aaPredicted RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 ASCC2Q9H1I8 757 aaPredicted RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 NHEJ1Q9H9Q4 299 aaPredicted RBP19.77■□□□□ 0.76
HLA-DQB1-201ENST00000374943 USO1O60763 962 aaKnown RBP19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 NOL4O94818 638 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PSAPP07602 524 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HSPA6P17066 643 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 COPB2P35606 906 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ALDH5A1P51649 535 aaPredicted RBP19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HERVK_113P62684 666 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MOGSQ13724 837 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ARMC9Q7Z3E5 817 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 LSM14BQ9BX40 385 aaKnown RBP19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 TAF1DQ9H5J8 278 aaPredicted RBP19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 AGPAT3Q9NRZ7 376 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CGNQ9P2M7 1197 aaKnown RBP19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SLC9A2Q9UBY0 812 aa19.76■□□□□ 0.75
HLA-DQB1-201ENST00000374943 A0A0U1RQJ8 604 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 IQCA1LA6NCM1 817 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 LRRC53A6NM62 1247 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 K7ENM7 598 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CLIC2O15247 247 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CNMDO75829 334 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 EDNRBP24530 442 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PSMC2P35998 433 aaKnown RBP19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CASP4P49662 377 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 TTLL12Q14166 644 aaPredicted RBP19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MOB2Q70IA6 237 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ATRIPQ8WXE1 791 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HAUS4Q9H6D7 363 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 TMEM206Q9H813 350 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PLCB1Q9NQ66 1216 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CEP350Q5VT06 3117 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GTPBP10A4D1E9 387 aaKnown RBP19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 STBD1O95210 358 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SLC25A27O95847 323 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 NCKAP1LP55160 1127 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CNTN2Q02246 1040 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 XKR9Q5GH70 373 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ABHD15Q6UXT9 468 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ANO5Q75V66 913 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 RRAGAQ7L523 313 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 FASTKD5Q7L8L6 764 aaKnown RBP19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 OTUD6AQ7L8S5 288 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CACNA2D4Q7Z3S7 1137 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 C12orf56Q8IXR9 622 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SLC35C1Q96A29 364 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GANQ9H2C0 597 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GABBR1Q9UBS5 961 aa19.75■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SIP14410 1827 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 IGSF9BQ9UPX0 1349 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 UNCXA6NJT0 531 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ZNF862O60290 1169 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 LCA5LO95447 670 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ACTR2P61160 394 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SNRPFP62306 86 aaKnown RBP19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 GTF2BQ00403 316 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 LDLRAD1Q5T700 205 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 UTP14CQ5TAP6 766 aaKnown RBP19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 DPY19L2P1Q6NXN4 242 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 FAM186BQ8IYM0 893 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 FAM133AQ8N9E0 248 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 OPTNQ96CV9 577 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ACCSQ96QU6 501 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ARHGAP20Q9P2F6 1191 aa19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ZNF215Q9UL58 517 aaPredicted RBP19.74■□□□□ 0.75
HLA-DQB1-201ENST00000374943 TMEM150BA6NC51 233 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 IPO7O95373 1038 aaKnown RBP19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PLA2G4FQ68DD2 849 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 MIS18BP1Q6P0N0 1132 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PNMA8AQ86V59 439 aaPredicted RBP19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 KSR1Q8IVT5 923 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 HVCN1Q96D96 273 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CCDC42Q96M95 316 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 IRX2Q9BZI1 471 aaPredicted RBP19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 C17orf75Q9HAS0 396 aa19.73■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SSU72P8A0A1W2PR75 194 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 POTEB2H3BUK9 544 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ATG7O95352 703 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 SUPT20HL2P0C7V6 817 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 NPEPPSP55786 919 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 PPP2R5AQ15172 486 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 NCAPG2Q86XI2 1143 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 ANKRD7Q92527 254 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 TSC1Q92574 1164 aa19.72■□□□□ 0.75
HLA-DQB1-201ENST00000374943 CRACR2AQ9BSW2 395 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms