RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
PRPF4-202ENST00000374199 ANKRD13AQ8IZ07 590 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 HAUS4Q9H6D7 363 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 SOCS7O14512 581 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ZNF862O60290 1169 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 FAM13AO94988 1023 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ABL1P00519 1130 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ANXA13P27216 316 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 COPB2P35606 906 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 KCNH2Q12809 1159 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 PCDHA10Q9Y5I2 948 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 BACH1O14867 736 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ZNF397Q8NF99 534 aaPredicted RBP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 PCDHB13Q9Y5F0 798 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRPF4-202ENST00000374199 SYNGAP1Q96PV0 1343 aa13.82□□□□□ -0.2
PRPF4-202ENST00000374199 ARHGEF35A5YM69 484 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 PRKCIP41743 596 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 SP2Q02086 613 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 SULF1Q8IWU6 871 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 AFAP1L1Q8TED9 768 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 BTNL10A8MVZ5 291 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 PPP1R12BO60237 982 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 GCNT3O95395 438 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 DLK2Q6UY11 383 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 SYT11Q9BT88 431 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 ZNF215Q9UL58 517 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 PON1P27169 355 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 KRT83P78385 493 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 DRC1Q96MC2 740 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
PRPF4-202ENST00000374199 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
PRPF4-202ENST00000374199 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 TADA3O75528 432 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 EPHX2P34913 555 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 CASP4P49662 377 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 KLHDC7AQ5VTJ3 777 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 FAM178BQ8IXR5 827 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 CSADQ9Y600 493 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 VAV2P52735 878 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 C1orf220Q5T0J3 134 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 NSMFQ6X4W1 530 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 IRF2BP2Q7Z5L9 587 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 MAP4K3Q8IVH8 894 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 TMEM161BQ8NDZ6 487 aa13.8□□□□□ -0.2
PRPF4-202ENST00000374199 JPH1Q9HDC5 661 aaPredicted RBP13.8□□□□□ -0.2
PRPF4-202ENST00000374199 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SLC25A27O95847 323 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 ATP4AP20648 1035 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 CYLC1P35663 651 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 PSMC2P35998 433 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 GJA5P36382 358 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 ODR4Q5SWX8 454 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 PAPD7Q5XG87 772 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 GPR88Q9GZN0 384 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SUPT20HL2P0C7V6 817 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 LRRN4CLQ8ND94 238 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 TAF1DQ9H5J8 278 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 LARSQ9P2J5 1176 aaKnown RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SLC9A2Q9UBY0 812 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 TELO2Q9Y4R8 837 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 P4HA2O15460 535 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SERPING1P05155 500 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 TGFB3P10600 412 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 SMCR8Q8TEV9 937 aaPredicted RBP13.79□□□□□ -0.2
PRPF4-202ENST00000374199 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 RBPJLQ9UBG7 517 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms