RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 NIM1KQ8IY84 436 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 ANKZF1Q9H8Y5 726 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
PTPRU-202ENST00000373779 PEX19P40855 299 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 USP11P51784 963 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 QRICH1Q2TAL8 776 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-202ENST00000373779 SOX5P35711 763 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 HAUS1Q96CS2 278 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 CEP170P1Q96L14 293 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 NPHP3-ACAD11A0A0J9YXS1 232 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-202ENST00000373779 BAG2O95816 211 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 BSPRYQ5W0U4 402 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 RFX6Q8HWS3 928 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 ZIM3Q96PE6 472 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-202ENST00000373779 MSH2P43246 934 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 NT5DC1Q5TFE4 455 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 LRRIQ3A6PVS8 624 aaPredicted RBP18.74■□□□□ 0.59
PTPRU-202ENST00000373779 GCLMP48507 274 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
PTPRU-202ENST00000373779 LRRD1A4D1F6 860 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 PDXKO00764 312 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 SF3B3Q15393 1217 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 CNOT8Q9UFF9 292 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 ANAPC7Q9UJX3 599 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 SARSP49591 514 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 DHX34Q14147 1143 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 PDXDC2PQ6P474 469 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 CCT8L2Q96SF2 557 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 H7C0C1 242 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 ATP5OP48047 213 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 PPP2R5AQ15172 486 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 DNAJC24Q6P3W2 148 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 NOP53Q9NZM5 478 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 KRT14P02533 472 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 TAF11Q15544 211 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 RNPC3Q96LT9 517 aaKnown RBP18.73■□□□□ 0.59
PTPRU-202ENST00000373779 MEGF6O75095 1541 aa18.73■□□□□ 0.59
PTPRU-202ENST00000373779 DRP2Q13474 957 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 TNFAIP1Q13829 316 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 NAB2Q15742 525 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 PAPD7Q5XG87 772 aaKnown RBP18.72■□□□□ 0.59
PTPRU-202ENST00000373779 PARP9Q8IXQ6 854 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 SCYL3Q8IZE3 742 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 XXYLT1Q8NBI6 393 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 PITPNM3Q9BZ71 974 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 AS3MTQ9HBK9 375 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 SEL1LQ9UBV2 794 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 FTLP02792 175 aaPredicted RBP18.72■□□□□ 0.59
PTPRU-202ENST00000373779 AKR1B1P15121 316 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 CARSP49589 748 aaKnown RBP18.72■□□□□ 0.59
PTPRU-202ENST00000373779 CORO7P57737 925 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 CA4P22748 312 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 ANXA13P27216 316 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 PEX3P56589 373 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 PPP2R5DQ14738 602 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 KLC4Q9NSK0 619 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 LRRC31Q6UY01 552 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 ZNF564Q8TBZ8 553 aaPredicted RBP18.72■□□□□ 0.59
PTPRU-202ENST00000373779 MIS12Q9H081 205 aa18.72■□□□□ 0.59
PTPRU-202ENST00000373779 RAD51CO43502 376 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 RFX1P22670 979 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 HERVK_113P62684 666 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 IRX4P78413 519 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 RCSD1Q6JBY9 416 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 MAPK13O15264 365 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 SLC16A3O15427 465 aaKnown RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 NOL3O60936 208 aaKnown RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 NTSR2O95665 410 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 PLEKP08567 350 aaPredicted RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 PLS3P13797 630 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 LSP1P33241 339 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 ACTN3Q08043 901 aaPredicted RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 DAGLBQ8NCG7 672 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 FBXW10Q5XX13 1052 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 RINT1Q6NUQ1 792 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 FAM160B2Q86V87 743 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 NUP85Q9BW27 656 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 UCHL3P15374 230 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 DYNLT1P63172 113 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 CAV1Q03135 178 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 CCDC137Q6PK04 289 aaKnown RBP18.71■□□□□ 0.59
PTPRU-202ENST00000373779 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 MAD1L1Q9Y6D9 718 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 PFASO15067 1338 aa18.71■□□□□ 0.59
PTPRU-202ENST00000373779 GH2P01242 217 aa18.71■□□□□ 0.58
PTPRU-202ENST00000373779 ACTN1P12814 892 aa18.71■□□□□ 0.58
PTPRU-202ENST00000373779 PADI6Q6TGC4 694 aa18.71■□□□□ 0.58
PTPRU-202ENST00000373779 AFAP1L2Q8N4X5 818 aa18.71■□□□□ 0.58
PTPRU-202ENST00000373779 GINS2Q9Y248 185 aa18.71■□□□□ 0.58
PTPRU-202ENST00000373779 IFT172Q9UG01 1749 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms