RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 AFPP02771 609 aaKnown RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 ITGA4P13612 1032 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 PECAM1P16284 738 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 EDRF1Q3B7T1 1238 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 DPY19L2P1Q6NXN4 242 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 L3MBTL1Q9Y468 752 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 UAP1Q16222 522 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 YTHDF3Q7Z739 585 aaKnown RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 LRRC57Q8N9N7 239 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 TMBIM4Q9HC24 238 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 SERPINB13Q9UIV8 391 aa17.22■□□□□ 0.35
PABPC4-201ENST00000372856 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
PABPC4-201ENST00000372856 AKAP3O75969 853 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 FLT3P36888 993 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 TRAF1Q13077 416 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 CATSPER3Q86XQ3 398 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 AMACRQ9UHK6 382 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 GCOM1H8Y6P7 765 aaPredicted RBP17.21■□□□□ 0.35
PABPC4-201ENST00000372856 KRIT1O00522 736 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PYGLP06737 847 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 MYZAPP0CAP1 466 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 XRCC5P13010 732 aaKnown RBP17.21■□□□□ 0.35
PABPC4-201ENST00000372856 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
PABPC4-201ENST00000372856 HOXD13P35453 343 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 CASP4P49662 377 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 SLC8A3P57103 927 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 GIT2Q14161 759 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 KNOP1Q1ED39 458 aaKnown RBP17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PRR16Q569H4 304 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 BZW1Q7L1Q6 419 aaKnown RBP17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 TPCN2Q8NHX9 752 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PBKQ96KB5 322 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 REEP2Q9BRK0 252 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PLCB1Q9NQ66 1216 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 SBF2Q86WG5 1849 aa17.21■□□□□ 0.35
PABPC4-201ENST00000372856 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 PGRMC1O00264 195 aaKnown RBP17.21■□□□□ 0.34
PABPC4-201ENST00000372856 CLIC2O15247 247 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 RSPH10BP0C881 870 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 PLCB4Q15147 1175 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 CDCA2Q69YH5 1023 aaPredicted RBP17.21■□□□□ 0.34
PABPC4-201ENST00000372856 ZC3H3Q8IXZ2 948 aaKnown RBP17.21■□□□□ 0.34
PABPC4-201ENST00000372856 UBLCP1Q8WVY7 318 aaPredicted RBP17.21■□□□□ 0.34
PABPC4-201ENST00000372856 ANO3Q9BYT9 981 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 KCNMB3Q9NPA1 279 aa17.21■□□□□ 0.34
PABPC4-201ENST00000372856 DAPK3O43293 454 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 SNAP25P60880 206 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 ICA1Q05084 483 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 HIBCHQ6NVY1 386 aaPredicted RBP17.2■□□□□ 0.34
PABPC4-201ENST00000372856 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 ACTRT1Q8TDG2 376 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 MXD3Q9BW11 206 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 PLIN4Q96Q06 1357 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 SHMT1P34896 483 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 CYP4A11Q02928 519 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 KCNA1Q09470 495 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
PABPC4-201ENST00000372856 FRMD5Q7Z6J6 570 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 TBC1D16Q8TBP0 767 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.342e-7■■■■□ 25
PABPC4-201ENST00000372856 IKZF4Q9H2S9 585 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 RPS6KL1Q9Y6S9 549 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 UTRNP46939 3433 aa17.2■□□□□ 0.34
PABPC4-201ENST00000372856 BTNL10A8MVZ5 291 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 FLOT1O75955 427 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 IFI16Q16666 785 aaKnown RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 C10orf76Q5T2E6 689 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 EMC10Q5UCC4 262 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 DAAM2Q86T65 1068 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 U2AF1L4Q8WU68 220 aaKnown RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 ZCWPW1Q9H0M4 648 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 PCDHB13Q9Y5F0 798 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 BZW2Q9Y6E2 419 aaKnown RBP17.19■□□□□ 0.34
PABPC4-201ENST00000372856 H0YGN5 161 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 TMOD1P28289 359 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 SCNN1DP51172 638 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 ZNF844Q08AG5 666 aa17.19■□□□□ 0.34
PABPC4-201ENST00000372856 CUL1Q13616 776 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms