RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 GLG1Q92896 1179 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 BHMG1C9JSJ3 638 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 FLOT1O75955 427 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 MMEP08473 750 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 PLA2G4BP0C869 781 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 PON1P27169 355 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 ELF3P78545 371 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 ASPRV1Q53RT3 343 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 UBAP2Q5T6F2 1119 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 NT5DC3Q86UY8 548 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 TACO1Q9BSH4 297 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 GAKO14976 1311 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 SPDYE3A6NKU9 549 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 KIF1CO43896 1103 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 H2AFZP0C0S5 128 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 CLNS1AP54105 237 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 MARSP56192 900 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 DPY19L2P1Q6NXN4 242 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 H2AFVQ71UI9 128 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 ARMC9Q7Z3E5 817 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 CCDC50Q8IVM0 306 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 CCDC197Q8NCU1 140 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 ATP8B4Q8TF62 1192 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 FAM129AQ9BZQ8 928 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 SLITRK6Q9H5Y7 841 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
COL9A2-202ENST00000372748 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
COL9A2-202ENST00000372748 CCT8L1PA6NM43 557 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 MGRN1O60291 552 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 CLTAP09496 248 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 GYS1P13807 737 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 ABCB4P21439 1286 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 NOVP48745 357 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 ZNF211Q13398 564 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-202ENST00000372748 NOD2Q9HC29 1040 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 SWAP70Q9UH65 585 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 UTRNP46939 3433 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L15C9J2P7 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L11C9JVI0 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L18D6R9N7 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L22D6RA61 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■■□□ 18.6
COL9A2-202ENST00000372748 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 ATP6V1G2O95670 118 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 STAT3P40763 770 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 IFNAR2P48551 515 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 PLTPP55058 493 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 IFI35P80217 286 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-202ENST00000372748 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-202ENST00000372748 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 C10orf76Q5T2E6 689 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 USP17L6PQ6QN14 398 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 TBC1D1Q86TI0 1168 aaPredicted RBP16.08■□□□□ 0.16
COL9A2-202ENST00000372748 TLCD1Q96CP7 247 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 KDM4CQ9H3R0 1056 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 STXBP5LQ9Y2K9 1186 aa16.08■□□□□ 0.16
COL9A2-202ENST00000372748 BUB1BO60566 1050 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 GFPT2O94808 682 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 TTLL1O95922 423 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 PAX7P23759 505 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 GABPAQ06546 454 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 TBC1D22AQ8WUA7 517 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 FAM114A2Q9NRY5 505 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 SUCLA2Q9P2R7 463 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 PPP1R9AQ9ULJ8 1098 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 CYP11B2P19099 503 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 SLCO1A2P46721 670 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 GALCP54803 685 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 LRRC34Q8IZ02 419 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 ZNF317Q96PQ6 595 aaPredicted RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 ELAC2Q9BQ52 826 aaKnown RBP16.07■□□□□ 0.16
COL9A2-202ENST00000372748 EPB41L4BQ9H329 900 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 BCAS3Q9H6U6 928 aa16.07■□□□□ 0.16
COL9A2-202ENST00000372748 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms