RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NUGGCQ68CJ6 796 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 DGKHQ86XP1 1220 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 POLIQ9UNA4 740 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 FAM196BA6NMK8 535 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 ZBTB5O15062 677 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 TOB2Q14106 344 aaPredicted RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 KLC2Q9H0B6 622 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 SUDS3Q9H7L9 328 aaPredicted RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 NPHP4O75161 1426 aaPredicted RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 E9PMD0 336 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 ESRRGP62508 458 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 KRT80Q6KB66 452 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 MID2Q9UJV3 735 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 ROBO2Q9HCK4 1378 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L15C9J2P7 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L13C9JLJ4 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L11C9JVI0 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L18D6R9N7 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L22D6RA61 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L17D6RBQ6 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L19D6RCP7 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L20D6RJB6 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 GFPT1Q06210 699 aaPredicted RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L24Q0WX57 530 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L6PQ6QN14 398 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 PACSIN2Q9UNF0 486 aaPredicted RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 CLDN3O15551 220 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 DHX38Q92620 1227 aaKnown RBP23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 RMDN3Q96TC7 470 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 HIPK4Q8NE63 616 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 MTRQ99707 1265 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 TMEM260Q9NX78 707 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 ZBBXA8MT70 800 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 F5H423 210 aaPredicted RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 NR3C1P04150 777 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 BZW1Q7L1Q6 419 aaKnown RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 RTKN2Q8IZC4 609 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 CYTH2Q99418 400 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 TMEM47Q9BQJ4 181 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 FAM213AQ9BRX8 229 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 CEP72Q9P209 647 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 H7C1W4 665 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 SLC16A4O15374 487 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 MMP10P09238 476 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 PRDX5P30044 214 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 OXER1Q8TDS5 423 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 MASTLQ96GX5 879 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 DYDC2Q96IM9 177 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 KLHL8Q9P2G9 620 aaPredicted RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 A0A0G2JND7 137 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 SETSIPP0DME0 302 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 RAD54LQ92698 747 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 SLITRK6Q9H5Y7 841 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 HEY1Q9Y5J3 304 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 SNAP23O00161 211 aa23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 HOXA7P31268 230 aaPredicted RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 TAF1BQ53T94 588 aaPredicted RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 ELAC2Q9BQ52 826 aaKnown RBP23.72■■□□□ 1.39
TM9SF3-201ENST00000371142 LRRC53A6NM62 1247 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 PFKFB3Q16875 520 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 HMGB1P1B2RPK0 211 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 ZNF699Q32M78 642 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 SPATA17Q96L03 361 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 SERPINI1Q99574 410 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 HSPA8P11142 646 aaKnown RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 CIITAP33076 1130 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 PADI6Q6TGC4 694 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 TMEM270Q6UE05 265 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 ANKARQ7Z5J8 1434 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 CRLF3Q8IUI8 442 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 CCDC124Q96CT7 223 aaKnown RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 ABHD10Q9NUJ1 306 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 USP17L10C9JJH3 530 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 MAPK13O15264 365 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 DNAJC8O75937 253 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 CYP2E1P05181 493 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 ASNSP08243 561 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 HIBCHQ6NVY1 386 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 RNF168Q8IYW5 571 aaPredicted RBP23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 ANGPTL2Q9UKU9 493 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 TMPRSS15P98073 1019 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 GOLPH3LQ9H4A5 285 aa23.71■■□□□ 1.39
TM9SF3-201ENST00000371142 PAMP19021 973 aa23.7■■□□□ 1.39
TM9SF3-201ENST00000371142 ZNF772Q68DY9 489 aaPredicted RBP23.7■■□□□ 1.39
TM9SF3-201ENST00000371142 TDRD3Q9H7E2 651 aaKnown RBP23.7■■□□□ 1.39
TM9SF3-201ENST00000371142 IPO5O00410 1097 aaKnown RBP23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 COPEO14579 308 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 TAC1P20366 129 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 GYS2P54840 703 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 STXBP2Q15833 593 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 TTC30BQ8N4P2 665 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 FRA10AC1Q70Z53 315 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 EPHA10Q5JZY3 1008 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 TBC1D9BQ66K14 1250 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 THEM5Q8N1Q8 247 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 PRR29P0C7W0 189 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 PRCPP42785 496 aa23.7■■□□□ 1.38
TM9SF3-201ENST00000371142 COASYQ13057 564 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms