RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
SS18L1-202ENST00000370848 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
SS18L1-202ENST00000370848 COL1A2P08123 1366 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 NCK2O43639 380 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 UPP2O95045 317 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 ATP4AP20648 1035 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 KCNA5P22460 613 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 IGBP1P78318 339 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 KRT76Q01546 638 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.32
SS18L1-202ENST00000370848 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 MIS18BP1Q6P0N0 1132 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 NME8Q8N427 588 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 TRAPPC12Q8WVT3 735 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 HAS1Q92839 578 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 RIT2Q99578 217 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 EPHX3Q9H6B9 360 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 TRPV2Q9Y5S1 764 aa17.08■□□□□ 0.32
SS18L1-202ENST00000370848 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
SS18L1-202ENST00000370848 CUL4AQ13619 759 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 UGCGQ16739 394 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 B3GNT9Q6UX72 402 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
SS18L1-202ENST00000370848 CMTR2Q8IYT2 770 aaKnown RBP17.07■□□□□ 0.32
SS18L1-202ENST00000370848 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 DISC1Q9NRI5 854 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 GABBR1Q9UBS5 961 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 SAMM50Q9Y512 469 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 C5orf42Q9H799 3197 aa17.07■□□□□ 0.32
SS18L1-202ENST00000370848 WDR64B1ANS9 1081 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 CD52P31358 61 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 LTBRP36941 435 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 PLA2G5P39877 138 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
SS18L1-202ENST00000370848 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 TRMT1LQ7Z2T5 733 aaKnown RBP17.06■□□□□ 0.32
SS18L1-202ENST00000370848 NPAS4Q8IUM7 802 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
SS18L1-202ENST00000370848 CELF4Q9BZC1 486 aaKnown RBP17.06■□□□□ 0.32
SS18L1-202ENST00000370848 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
SS18L1-202ENST00000370848 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 VAV3Q9UKW4 847 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 PCDHA10Q9Y5I2 948 aa17.06■□□□□ 0.32
SS18L1-202ENST00000370848 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 ZBTB42B2RXF5 422 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 EML1O00423 815 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 HBP1O60381 514 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 PSAPP07602 524 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 IL9P15248 144 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 CTNNB1P35222 781 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 CAMK1Q14012 370 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 NBR1Q14596 966 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 MTHFD1LQ6UB35 978 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 MIER3Q7Z3K6 550 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 GJD3Q8N144 294 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 PADI3Q9ULW8 664 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 MAFBQ9Y5Q3 323 aaPredicted RBP17.05■□□□□ 0.32
SS18L1-202ENST00000370848 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
SS18L1-202ENST00000370848 WDR81Q562E7 1941 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 TRIOO75962 3097 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 C19orf67A6NJJ6 358 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 GRM6O15303 877 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 ZNF862O60290 1169 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
SS18L1-202ENST00000370848 TMEM31Q5JXX7 168 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 NOSTRINQ8IVI9 506 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 NAP1L4Q99733 375 aaKnown RBP17.04■□□□□ 0.32
SS18L1-202ENST00000370848 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
SS18L1-202ENST00000370848 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-202ENST00000370848 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-202ENST00000370848 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-202ENST00000370848 M0QZ92 97 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 NEMFO60524 1076 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 MCM7P33993 719 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 JAK3P52333 1124 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 HYAL1Q12794 435 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-202ENST00000370848 ZNF174Q15697 407 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 FAM20AQ96MK3 541 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-202ENST00000370848 ERVK-5Q9HDB9 667 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 FAM50BQ9Y247 325 aa17.03■□□□□ 0.32
SS18L1-202ENST00000370848 TMEM150BA6NC51 233 aa17.02■□□□□ 0.32
SS18L1-202ENST00000370848 TBX3O15119 743 aa17.02■□□□□ 0.32
SS18L1-202ENST00000370848 MARCH6O60337 910 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms