RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 BMP3P12645 472 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MYF5P13349 255 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GLB1P16278 677 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TNFSF4P23510 183 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PPM1AP35813 382 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PIK3CBP42338 1070 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CASP5P51878 434 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ICA1Q05084 483 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PPFIA1Q13136 1202 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KCTD2Q14681 263 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PITRM1Q5JRX3 1037 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ZNF280DQ6N043 979 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TIGD7Q6NT04 549 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CCDC62Q6P9F0 684 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GPR155Q7Z3F1 870 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RIOX2Q8IUF8 465 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PDILTQ8N807 584 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 C7orf31Q8N865 590 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MARCH10Q8NA82 808 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PIP4K2CQ8TBX8 421 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RSAD2Q8WXG1 361 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ARL8AQ96BM9 186 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 TRIM11Q96F44 468 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CDK5RAP3Q96JB5 506 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ZC3H10Q96K80 434 aaKnown RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HEXIM2Q96MH2 286 aaKnown RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NEUROD6Q96NK8 337 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PLVAPQ9BX97 442 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LRRC27Q9C0I9 530 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CERS4Q9HA82 394 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RRAGCQ9HB90 399 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IFT122Q9HBG6 1241 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 DCP1AQ9NPI6 582 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SAGE1Q9NXZ1 904 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 BTG4Q9NY30 223 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GPRC5BQ9NZH0 403 aa4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-1249P-201ENST00000363237 A0A088AWK7 358 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PRSS38A1L453 326 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 C22orf46C9J442 243 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RBAK-RBAKDNI3L0D1 243 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FRS3O43559 492 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ZNF500O60304 480 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FKTNO75072 461 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CELA2BP08218 269 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SLURP2P0DP57 97 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 HOXB4P17483 251 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ABCB4P21439 1286 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FPR2P25090 351 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IL6STP40189 918 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 WASP42768 502 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MAPK9P45984 424 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CEBPAP49715 358 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 EPHA5P54756 1037 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 RASSF7Q02833 373 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CNGB1Q14028 1251 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CYP27C1Q4G0S4 372 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PAN2Q504Q3 1202 aaKnown RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PRRT3Q5FWE3 981 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FAM209BQ5JX69 171 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 THEMIS2Q5TEJ8 643 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 CYP4F22Q6NT55 531 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 OGFOD3Q6PK18 319 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 KCTD1Q719H9 257 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 ANKRD18AQ8IVF6 992 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MYCT1Q8N699 235 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NAXEQ8NCW5 288 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NLGN2Q8NFZ4 835 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 SNRNP27Q8WVK2 155 aaKnown RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 BRI3BPQ8WY22 251 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 FERMT2Q96AC1 680 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 APIPQ96GX9 242 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MYRFLQ96LU7 910 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 UBL7Q96S82 380 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 MARCH2Q9P0N8 246 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 STXBP5LQ9Y2K9 1186 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 GPR52Q9Y2T5 361 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 LRRFIP2Q9Y608 721 aaKnown RBP4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 NUMBLQ9Y6R0 609 aa4.47□□□□□ -1.69
RNU6-1249P-201ENST00000363237 A0A087WV62 115 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 ST20-MTHFSA0A0A6YYL1 179 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 A0A1B0GVC2 190 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 UBA6A0AVT1 1052 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 CCDC154A6NI56 674 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SLC16A6O15403 523 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 FOXP2O15409 715 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 HTRA2O43464 458 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 BUB1BO60566 1050 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 AGR2O95994 175 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 RPLP2P05387 115 aaKnown RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 LPLP06858 475 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TMEM253P0C7T8 217 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 TECP42680 631 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 EIF5P55010 431 aaKnown RBP4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 KRT76Q01546 638 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 BLMHQ13867 455 aa4.46□□□□□ -1.7
RNU6-1249P-201ENST00000363237 SPIDRQ14159 915 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms