RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ARIH2O95376 493 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 TXNP10599 105 aaKnown RBP15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 CYP2B6P20813 491 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 CDC25BP30305 580 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 PRKCEQ02156 737 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 XKR9Q5GH70 373 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 CCDC62Q6P9F0 684 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 NOC3LQ8WTT2 800 aaKnown RBP15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 SEPT1Q8WYJ6 367 aa15.32■□□□□ 0.04
PDLIM5-203ENST00000359265 IGKV6D-21A0A0A0MT36 114 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 GSTTP1A0A1W2PQM5 241 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 RBM47A0AV96 593 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 ZNF862O60290 1169 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 ZNF18P17022 549 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 CDK11BP21127 795 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 FANCCQ00597 558 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 SPAG1Q07617 926 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 XKR3Q5GH77 459 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 TTI2Q6NXR4 508 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 DHX37Q8IY37 1157 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 TSG101Q99816 390 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 PARVGQ9HBI0 331 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 SEPT9Q9UHD8 586 aaPredicted RBP15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 PCDHA2Q9Y5H9 948 aa15.31■□□□□ 0.04
PDLIM5-203ENST00000359265 TRIM49BA6NDI0 452 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 HIP1RO75146 1068 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 UBE4BO95155 1302 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 SNAI1O95863 264 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 SERPINC1P01008 464 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 GH1P01241 217 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 TPM3P06753 285 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 ATP1A3P13637 1013 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 TCF7P36402 384 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 ZNF131P52739 623 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 LRRC63Q05C16 580 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 UTP14CQ5TAP6 766 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 CDKAL1Q5VV42 579 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 PLA2G4FQ68DD2 849 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 CENPPQ6IPU0 288 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 STXBP4Q6ZWJ1 553 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 AFAP1L1Q8TED9 768 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 U2AF1L4Q8WU68 220 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 FAM167AQ96KS9 214 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 DRC1Q96MC2 740 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 KATNBL1Q9H079 304 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 SAMSN1Q9NSI8 373 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 TBC1D7Q9P0N9 293 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 IFNKQ9P0W0 207 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 TELO2Q9Y4R8 837 aa15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 MAFBQ9Y5Q3 323 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-203ENST00000359265 SIP14410 1827 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 STBD1O95210 358 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 OATP04181 439 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 PTMAP06454 111 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 PLA2G5P39877 138 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 FLT3LGP49771 235 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 PRKCZQ05513 592 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 ACVR2BQ13705 512 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 LRRC41Q15345 812 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 ANO5Q75V66 913 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 FAM114A1Q8IWE2 563 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 CSGALNACT2Q8N6G5 542 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 CEP170P1Q96L14 293 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 SPATA33Q96N06 139 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 GPR20Q99678 358 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 THAP9Q9H5L6 903 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 LARSQ9P2J5 1176 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 SRRDQ9UH36 339 aa15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-203ENST00000359265 KAT6AQ92794 2004 aa15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 TMEM150BA6NC51 233 aa15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 LGR5O75473 907 aa15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 DGAT1O75907 488 aa15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 GCNT3O95395 438 aa15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-203ENST00000359265 GRK4P32298 578 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms