RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ZMYM2Q9UBW7 1377 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 NRDCO43847 1150 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 STX10O60499 249 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 DNM2P50570 870 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 KNOP1Q1ED39 458 aaKnown RBP13.9□□□□□ -0.18
GGPS1-202ENST00000358966 TMEM63BQ5T3F8 832 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
GGPS1-202ENST00000358966 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 LZTFL1Q9NQ48 299 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 CWC15Q9P013 229 aaKnown RBP13.9□□□□□ -0.18
GGPS1-202ENST00000358966 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
GGPS1-202ENST00000358966 ANO5Q75V66 913 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 CCDC60Q8IWA6 550 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-202ENST00000358966 FAM178BQ8IXR5 827 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 AKAP3O75969 853 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 PLEKP08567 350 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-202ENST00000358966 PPP1R2P41236 205 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 CNGA4Q8IV77 575 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 PANX2Q96RD6 677 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 MAP3K20Q9NYL2 800 aaKnown RBP13.89□□□□□ -0.19
GGPS1-202ENST00000358966 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
GGPS1-202ENST00000358966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.89□□□□□ -0.19
GGPS1-202ENST00000358966 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 XKR9Q5GH70 373 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 DCAF17Q5H9S7 520 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 WDR59Q6PJI9 974 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 CCDC43Q96MW1 224 aaKnown RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 PORCNQ9H237 461 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 ALDH5A1P51649 535 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 GPAT2Q6NUI2 795 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 CALR3Q96L12 384 aaKnown RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 JPH1Q9HDC5 661 aaPredicted RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
GGPS1-202ENST00000358966 LUC7L2Q9Y383 392 aaKnown RBP13.88□□□□□ -0.19
GGPS1-202ENST00000358966 FAM170AA1A519 330 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 K7ENM7 598 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 TPM1P09493 284 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 CYP2J2P51589 502 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 KCNMA1Q12791 1236 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 PPIL2Q13356 520 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 PPP2R5AQ15172 486 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 PROCA1Q8NCQ7 364 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-202ENST00000358966 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM10Q9UDY6 481 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 USP20Q9Y2K6 914 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 SLC26A4O43511 780 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 NR3C1P04150 777 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 PLA2G4AP47712 749 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 ACTR2P61160 394 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 TCERG1LQ5VWI1 586 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 ZNF720Q7Z2F6 126 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 ARMC9Q7Z3E5 817 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 GPRASP2Q96D09 838 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 OLFML3Q9NRN5 406 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 DNAI1Q9UI46 699 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 KCNH4Q9UQ05 1017 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 MYPNQ86TC9 1320 aa13.87□□□□□ -0.19
GGPS1-202ENST00000358966 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 ACTN1P12814 892 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 MAP2K2P36507 400 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 BIRC2Q13490 618 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 WDR24Q96S15 920 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 PCDHA10Q9Y5I2 948 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.86□□□□□ -0.19
GGPS1-202ENST00000358966 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 MYH9P35579 1960 aaKnown RBP13.86□□□□□ -0.19
GGPS1-202ENST00000358966 A0A0G2JMZ2 1700 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 ZNF131P52739 623 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 PEX3P56589 373 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 PSMC5P62195 406 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 KRT76Q01546 638 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 ENOX2Q16206 610 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms