RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TRMT13Q9NUP7 481 aaKnown RBP16.96■□□□□ 0.3
TPM1-206ENST00000358278 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.3
TPM1-206ENST00000358278 NR1I2O75469 434 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 C22orf31O95567 290 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 SLFN14P0C7P3 912 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 CDK7P50613 346 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 HIC1Q14526 733 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 SNX17Q15036 470 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 UBE2Q1Q7Z7E8 422 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 CNNM3Q8NE01 707 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 ZBTB10Q96DT7 871 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 CEP89Q96ST8 783 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 MTRQ99707 1265 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 DHX33Q9H6R0 707 aaKnown RBP16.95■□□□□ 0.3
TPM1-206ENST00000358278 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 ATP11BQ9Y2G3 1177 aa16.95■□□□□ 0.3
TPM1-206ENST00000358278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 MBLAC1A4D2B0 266 aaPredicted RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 TLR3O15455 904 aaKnown RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 ACTN4O43707 911 aaKnown RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 B4GALT4O60513 344 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 KINO60870 393 aaKnown RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 MAFO75444 373 aaPredicted RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 ADAM17P78536 824 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 SNW1Q13573 536 aaKnown RBP16.94■□□□□ 0.3
TPM1-206ENST00000358278 LONRF3Q496Y0 759 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 C1orf53Q5VUE5 145 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 RINT1Q6NUQ1 792 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 LRRC71Q8N4P6 559 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 RUSC1Q9BVN2 902 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 TANC1Q9C0D5 1861 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 SIP14410 1827 aa16.94■□□□□ 0.3
TPM1-206ENST00000358278 GAS2O43903 313 aaKnown RBP16.93■□□□□ 0.3
TPM1-206ENST00000358278 CYP2C9P11712 490 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 TMOD1P28289 359 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 DNM2P50570 870 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 RTP1P59025 263 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 AMPD3Q01432 767 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 LRRC26Q2I0M4 334 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 EFCAB12Q6NXP0 572 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 MAEAQ7L5Y9 396 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 FAM126BQ8IXS8 530 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 ENGASEQ8NFI3 743 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 STAMQ92783 540 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 DCDC2CA8MYV0 355 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 CYP11B2P19099 503 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 AFMP43652 599 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 CLCN3P51790 818 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 FAM102BQ5T8I3 360 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 TAF2Q6P1X5 1199 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 KRBA2Q6ZNG9 492 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 MAP7D2Q96T17 732 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
TPM1-206ENST00000358278 FAM49AQ9H0Q0 323 aaPredicted RBP16.93■□□□□ 0.3
TPM1-206ENST00000358278 PTMSP20962 102 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 TLE2Q04725 743 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 RUFY4Q6ZNE9 571 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 DYMQ7RTS9 669 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 SERINC5Q86VE9 423 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 AKT3Q9Y243 479 aa16.92■□□□□ 0.3
TPM1-206ENST00000358278 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 SMIM35A0A1B0GVV1 85 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 MBD3O95983 291 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 GUCY2CP25092 1073 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 PTK7Q13308 1070 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 KANK3Q6NY19 840 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 RSPH3Q86UC2 560 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 GRAMD1CQ8IYS0 662 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 DDX12PQ92771 950 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 TOX2Q96NM4 488 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
TPM1-206ENST00000358278 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
TPM1-206ENST00000358278 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 MYMKA6NI61 221 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 CD4P01730 458 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 DNAJB3Q8WWF6 145 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 PSPC1Q8WXF1 523 aaKnown RBP16.9■□□□□ 0.3
TPM1-206ENST00000358278 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 DRC1Q96MC2 740 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 CTAGE1Q96RT6 745 aa16.9■□□□□ 0.3
TPM1-206ENST00000358278 REEP2Q9BRK0 252 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms