RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FXR2P51116 673 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CASP5P51878 434 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CYP4A11Q02928 519 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF211Q13398 564 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 HIBCHQ6NVY1 386 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CRELD2Q6UXH1 353 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 RUFY4Q6ZNE9 571 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 KCTD1Q719H9 257 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 ARHGAP22Q7Z5H3 698 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 TAX1BP1Q86VP1 789 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CACNA2D3Q8IZS8 1091 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PROM2Q8N271 834 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 WDR66Q8TBY9 1149 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SCFD1Q8WVM8 642 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 DNAJC19Q96DA6 116 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRC4CQ9HCJ2 640 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CNOT8Q9UFF9 292 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 ARMCX3Q9UH62 379 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 UTP11Q9Y3A2 253 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 LIN7AO14910 233 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CTNND1O60716 968 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 XRCC5P13010 732 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 KRT13P13646 458 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 GCLCP48506 637 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 ELF3P78545 371 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRC23Q53EV4 343 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 TRIM59Q8IWR1 403 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 NOP53Q9NZM5 478 aaKnown RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 NAGPAQ9UK23 515 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLCH1Q4KWH8 1693 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 RBAK-RBAKDNI3L0D1 243 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 FLOT1O75955 427 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 SLURP2P0DP57 97 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 SLCO1A2P46721 670 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 IFNAR2P48551 515 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP11P51784 963 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 PPP2R2AP63151 447 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 GSTO1P78417 241 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 GKAP1Q5VSY0 366 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 DPP8Q6V1X1 898 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 VPS36Q86VN1 386 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 CCHCR1Q8TD31 782 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 RAPGEF5Q92565 580 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 SEC16BQ96JE7 1060 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.987e-7■□□□□ 9.3
CDC42SE1-201ENST00000357235 KDM4CQ9H3R0 1056 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 OSGEPQ9NPF4 335 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF232Q9UNY5 417 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 PCDHGA4Q9Y5G9 962 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRP5O75197 1615 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 LDHCP07864 332 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 LINGO3P0C6S8 592 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 CUL1Q13616 776 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 BLMHQ13867 455 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 IFI16Q16666 785 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 RBM12BQ8IXT5 1001 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 MREGQ8N565 214 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 MARCH10Q8NA82 808 aaPredicted RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 NEDD1Q8NHV4 660 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 HAS1Q92839 578 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 GLG1Q92896 1179 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 EDEM3Q9BZQ6 932 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 BCAS3Q9H6U6 928 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 PSTPIP2Q9H939 334 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLCB1Q9NQ66 1216 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 GGT7Q9UJ14 662 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 PNMA2Q9UL42 364 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 LEMD3Q9Y2U8 911 aa8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 RTCBQ9Y3I0 505 aaKnown RBP8.93□□□□□ -0.98
CDC42SE1-201ENST00000357235 TMEM110-MUSTN1A8MSY1 372 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 LUC7L3O95232 432 aaKnown RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 H2AFZP0C0S5 128 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLTPP55058 493 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZCWPW2Q504Y3 356 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 H2AFVQ71UI9 128 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PNMA8AQ86V59 439 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 LINC00116Q8NCU8 138 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLEKHG4BQ96PX9 1271 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 IKZF4Q9H2S9 585 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 GCNT4Q9P109 453 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CHORDC1Q9UHD1 332 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 BLOC1S6Q9UL45 172 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 NR2E1Q9Y466 385 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 L3MBTL1Q9Y468 752 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ABCB11O95342 1321 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CASZ1Q86V15 1759 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 AHDC1Q5TGY3 1603 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 SRRM3A6NNA2 597 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 GNPATO15228 680 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZSCAN9O15535 394 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 GCNT3O95395 438 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 GNA14O95837 355 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CLTAP09496 248 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms