RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 AGBL2Q5U5Z8 902 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 VGLL2Q8N8G2 317 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 H0YIN7 160 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 STXBP3O00186 592 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 CACNB3P54284 484 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 TRAF1Q13077 416 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 CROCCP2Q86T23 111 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 ADAM33Q9BZ11 813 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 MST1RQ04912 1400 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 UCHL3P15374 230 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 FGFR2P21802 821 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
BDNF-202ENST00000356660 GALCP54803 685 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
BDNF-202ENST00000356660 YTHDF3Q7Z739 585 aaKnown RBP13.55□□□□□ -0.24
BDNF-202ENST00000356660 PHLDB2Q86SQ0 1253 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 SH3RF3Q8TEJ3 882 aaPredicted RBP13.55□□□□□ -0.24
BDNF-202ENST00000356660 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 P3H4Q92791 437 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 EDEM3Q9BZQ6 932 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
BDNF-202ENST00000356660 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 USP17L5A8MUK1 530 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 UBOX5O94941 541 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 ADCY8P40145 1251 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 GRM4Q14833 912 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 UAP1Q16222 522 aaPredicted RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 LONRF1Q17RB8 773 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 SRRM1Q8IYB3 904 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 PROM2Q8N271 834 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 PRCCQ92733 491 aaPredicted RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 ORC4O43929 436 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 FERP16591 822 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 STAT3P40763 770 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 KCNJ1P48048 391 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 POLE2P56282 527 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 DDR1Q08345 913 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 NAGPAQ9UK23 515 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 KRT5P13647 590 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 ERFP50548 548 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 IFI35P80217 286 aaPredicted RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 GRB10Q13322 594 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 PPP2R5EQ16537 467 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 DBN1Q16643 649 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 C10orf76Q5T2E6 689 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 EPS8L3Q8TE67 593 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 MCM8Q9UJA3 840 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
BDNF-202ENST00000356660 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
BDNF-202ENST00000356660 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 FNTAP49354 379 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 GRM1Q13255 1194 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 TNFRSF25Q93038 417 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 NUDT12Q9BQG2 462 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 ZNF662Q6ZS27 426 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 ZNF571Q7Z3V5 609 aaPredicted RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 BAP1Q92560 729 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 STMN2Q93045 179 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 RAB3IPQ96QF0 476 aaPredicted RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 PURBQ96QR8 312 aaKnown RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 OSGEPQ9NPF4 335 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 SERPINB2P05120 415 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 BRAFP15056 766 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 FAM186BQ8IYM0 893 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
BDNF-202ENST00000356660 CCHCR1Q8TD31 782 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 MCUR1Q96AQ8 359 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 PITPNM3Q9BZ71 974 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 ANAPC4Q9UJX5 808 aa13.53□□□□□ -0.24
BDNF-202ENST00000356660 PASKQ96RG2 1323 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms