RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 KLK7P49862 253 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 MFAP3P55082 362 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 CFAP221Q4G0U5 840 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 ALKBH5Q6P6C2 394 aaKnown RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 C15orf52Q6ZUT6 534 aaKnown RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 MORC2Q9Y6X9 1032 aaPredicted RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 PEX10O60683 326 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 RPA1P27694 616 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 MTRQ99707 1265 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 JPH2Q9BR39 696 aaPredicted RBP13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 HYOU1Q9Y4L1 999 aa13.4□□□□□ -0.26
PCDHB11-201ENST00000354757 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 FDX1P10109 184 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 SOX10P56693 466 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 IVLP07476 585 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 PRKCEQ02156 737 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 HPSEQ9Y251 543 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 COL14A1Q05707 1796 aaKnown RBP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 ZEB2O60315 1214 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 PNMA6AP0CW24 399 aaPredicted RBP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 CYP2C8P10632 490 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 MED10Q9BTT4 135 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 UNC45AQ9H3U1 944 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 USP20Q9Y2K6 914 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 ANKRD65E5RJM6 399 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 CTIFO43310 598 aaKnown RBP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 SRGAP2O75044 1071 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 PPP2R5DQ14738 602 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
PCDHB11-201ENST00000354757 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 FERP16591 822 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 KCNB1Q14721 858 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 CFAP58Q5T655 872 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 TFR2Q9UP52 801 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 IKBKGQ9Y6K9 419 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 KRIT1O00522 736 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 DAPK3O43293 454 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 ATP2C2O75185 946 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 CYP11B2P19099 503 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 TKFCQ3LXA3 575 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 GPRC5DQ9NZD1 345 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 EGFRP00533 1210 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 P4HA1P13674 534 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 HPDP32754 393 aaPredicted RBP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 MUM1L1Q5H9M0 696 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 CAPN12Q6ZSI9 719 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 CCDC26Q8TAB7 109 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 SYTL5Q8TDW5 730 aaPredicted RBP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
PCDHB11-201ENST00000354757 MYO1FO00160 1098 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 INTS8Q75QN2 995 aaKnown RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 CTSHP09668 335 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 VAMP7P51809 220 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 GPC2Q8N158 579 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 BPIFA3Q9BQP9 254 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 RPF1Q9H9Y2 349 aaKnown RBP13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
PCDHB11-201ENST00000354757 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms