RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DMGDHQ9UI17 866 aaKnown RBP9.45□□□□□ -0.9
TRIM55-204ENST00000353317 PLAGL2Q9UPG8 496 aa9.45□□□□□ -0.9
TRIM55-204ENST00000353317 JRKLQ9Y4A0 524 aa9.45□□□□□ -0.9
TRIM55-204ENST00000353317 UBIAD1Q9Y5Z9 338 aa9.45□□□□□ -0.9
TRIM55-204ENST00000353317 BRCA2P51587 3418 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 GOLGA6BA6NDN3 693 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 TBX3O15119 743 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CHMP2AO43633 222 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CELF2O95319 508 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MYCLP12524 364 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 OAZ1P54368 228 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 ASIC1P78348 528 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MRPS25P82663 173 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 TKFCQ3LXA3 575 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 HYIQ5T013 277 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 KIAA0895Q8NCT3 520 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 TRIM58Q8NG06 486 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 RAD54LQ92698 747 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 C7orf25Q9BPX7 421 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 PAGR1Q9BTK6 254 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SEMA6BQ9H3T3 888 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CUEDC2Q9H467 287 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MLXIPQ9HAP2 919 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 FAM184BQ9ULE4 1060 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 AGTPBP1Q9UPW5 1226 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CTDP1Q9Y5B0 961 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SHOX2O60902 331 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 FDX1P10109 184 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 HNRNPH3P31942 346 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MAGEA9P43362 315 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CORO7P57737 925 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 CACNB1Q02641 598 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SPA17Q15506 151 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 ARSHQ5FYA8 562 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 KRT79Q5XKE5 535 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 PCNX4Q63HM2 1172 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 FAM114A1Q8IWE2 563 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 SPATA4Q8NEY3 305 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 LARP4BQ92615 738 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 HSD17B14Q9BPX1 270 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 MOV10L1Q9BXT6 1211 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 IFIH1Q9BYX4 1025 aaKnown RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 TSGA10Q9BZW7 698 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 UNC45AQ9H3U1 944 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 FAM207AQ9NSI2 230 aaPredicted RBP9.44□□□□□ -0.9
TRIM55-204ENST00000353317 PCDHA13Q9Y5I0 950 aa9.44□□□□□ -0.9
TRIM55-204ENST00000353317 GOLGA6CA6NDK9 693 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 IPO5O00410 1097 aaKnown RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SLITRK3O94933 977 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 MOCS3O95396 460 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 GOLGA6DP0CG33 693 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 CXCR5P32302 372 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 CTTNQ14247 550 aaKnown RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 LRCH2Q5VUJ6 765 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 IQCEQ6IPM2 695 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 MMGT1Q8N4V1 131 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 DNAJC19Q96DA6 116 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 CALML4Q96GE6 196 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 PSMB7Q99436 277 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 NAP1L4Q99733 375 aaKnown RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 PTPN18Q99952 460 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 EIF2AK1Q9BQI3 630 aaKnown RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 ZNF577Q9BSK1 485 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 FGFBP2Q9BYJ0 223 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SPATC1LQ9H0A9 340 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 MAGEF1Q9HAY2 307 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 GBA2Q9HCG7 927 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 GOLGA6AQ9NYA3 693 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 MYPNQ86TC9 1320 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 TRPM7Q96QT4 1865 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 NR3C2P08235 984 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 NOP2P46087 812 aaKnown RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 KIF11P52732 1056 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SLC7A5Q01650 507 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 FKBP15Q5T1M5 1219 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 CENPPQ6IPU0 288 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 ZNF572Q7Z3I7 529 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-204ENST00000353317 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 FAM76AQ8TAV0 307 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 BRI3BPQ8WY22 251 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 OSBPL9Q96SU4 736 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 ACAD9Q9H845 621 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 SALL4Q9UJQ4 1053 aa9.43□□□□□ -0.9
TRIM55-204ENST00000353317 BTBD19C9JJ37 291 aa9.42□□□□□ -0.9
TRIM55-204ENST00000353317 USO1O60763 962 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms