RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 KRT18P05783 430 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 SMIM10L2AP0DMW4 78 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 SMIM10L2BP0DMW5 78 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 GUCY2CP25092 1073 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 ACLYP53396 1101 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 IGBP1P78318 339 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 KMT5BQ4FZB7 885 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 NT5DC1Q5TFE4 455 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 HPS3Q969F9 1004 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 CCDC34Q96HJ3 373 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 LRRC27Q9C0I9 530 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 DHX33Q9H6R0 707 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 GRIN2DO15399 1336 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 SFI1A8K8P3 1242 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 HIP1RO75146 1068 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 MYL1P05976 194 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 IDEP14735 1019 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 BMP6P22004 513 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 RGS19P49795 217 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 PPFIA1Q13136 1202 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 GRIK4Q16099 956 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 ZNF484Q5JVG2 852 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 MARCH8Q5T0T0 291 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 UNC13DQ70J99 1090 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 PCSK9Q8NBP7 692 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 SETD4Q9NVD3 440 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 OGDHLQ9ULD0 1010 aa21.1■□□□□ 0.97
CHMP4A-201ENST00000347519 FRMD3A2A2Y4 597 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 MAFO75444 373 aaPredicted RBP21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 DGAT1O75907 488 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 SMC2O95347 1197 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 C22orf31O95567 290 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 MKRN4PQ13434 485 aaPredicted RBP21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 DRP2Q13474 957 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 EMC2Q15006 297 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 NBPF20Q3BBV1 942 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 FUCA2Q9BTY2 467 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 PANK4Q9NVE7 773 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 KCND2Q9NZV8 630 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
CHMP4A-201ENST00000347519 COL1A2P08123 1366 aa21.08■□□□□ 0.97
CHMP4A-201ENST00000347519 IGKV6-21A0A0C4DH24 114 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 RFC5P40937 340 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 POLGP54098 1239 aaPredicted RBP21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 ZNF200P98182 395 aaPredicted RBP21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 EHHADHQ08426 723 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 COASYQ13057 564 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 LRRC71Q8N4P6 559 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 ARRDC4Q8NCT1 418 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 LMBR1Q8WVP7 490 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 TMEM143Q96AN5 459 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 TSEN34Q9BSV6 310 aaKnown RBP21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 KATNAL1Q9BW62 490 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 FGFBP2Q9BYJ0 223 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 CRISPLD2Q9H0B8 497 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 ATP6V0A4Q9HBG4 840 aa21.08■□□□□ 0.96
CHMP4A-201ENST00000347519 PVALEFA0A1B0GWK0 134 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 LETM1O95202 739 aaPredicted RBP21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 KLRC1P26715 233 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 MNX1P50219 401 aaPredicted RBP21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 ADAM17P78536 824 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 TBC1D8BQ0IIM8 1120 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 MORC3Q14149 939 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 KCNB1Q14721 858 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 FAM102BQ5T8I3 360 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 BSNDQ8WZ55 320 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 GSDMAQ96QA5 445 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 ZHX3Q9H4I2 956 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 PPME1Q9Y570 386 aa21.07■□□□□ 0.96
CHMP4A-201ENST00000347519 MOXD2PA6NHM9 499 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 SGPL1O95470 568 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 GJB1P08034 283 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 HOXC8P31273 242 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 ZNF131P52739 623 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 MTHFD1LQ6UB35 978 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 SFR1Q86XK3 245 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 CCDC65Q8IXS2 484 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 LINC01465Q8N7H1 131 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 GLIS3Q8NEA6 775 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 POLR3FQ9H1D9 316 aaPredicted RBP21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 TBC1D7Q9P0N9 293 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 ODF2LQ9ULJ1 636 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 PHF24Q9UPV7 400 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 GDAQ9Y2T3 454 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 PCDHA2Q9Y5H9 948 aa21.06■□□□□ 0.96
CHMP4A-201ENST00000347519 BRCA2P51587 3418 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 A0A1W2PQ45 241 aaPredicted RBP21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 A0A1W2PQY0 241 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 TBCAO75347 108 aaKnown RBP21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 RHOBTB3O94955 611 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 FAM13AO94988 1023 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 ARL2P36404 184 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 CLCN3P51790 818 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 MLLT1Q03111 559 aaPredicted RBP21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 TYRO3Q06418 890 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 SMYD4Q8IYR2 804 aaPredicted RBP21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 MCPH1Q8NEM0 835 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 ASAP3Q8TDY4 903 aa21.05■□□□□ 0.96
CHMP4A-201ENST00000347519 SLC7A3Q8WY07 619 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms