RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 CSADQ9Y600 493 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L15C9J2P7 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L13C9JLJ4 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L11C9JVI0 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L18D6R9N7 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L22D6RA61 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L17D6RBQ6 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L19D6RCP7 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L20D6RJB6 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 LRRN2O75325 713 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 SERPING1P05155 500 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 PCYT1AP49585 367 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 SNAP25P60880 206 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L24Q0WX57 530 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 USP17L6PQ6QN14 398 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 RUBCNQ92622 972 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 RNPC3Q96LT9 517 aaKnown RBP16.66■□□□□ 0.26
SRPK1-201ENST00000346162 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 ZFATQ9P243 1243 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 PVALEFA0A1B0GWK0 134 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 PRPF6O94906 941 aaKnown RBP16.66■□□□□ 0.26
SRPK1-201ENST00000346162 IFNB1P01574 187 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 CNGA1P29973 690 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 NFIXQ14938 502 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 TUBB6Q9BUF5 446 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 ZMYND12Q9H0C1 365 aa16.66■□□□□ 0.26
SRPK1-201ENST00000346162 AP3B2Q13367 1082 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 FAM43BQ6ZT52 329 aaPredicted RBP16.65■□□□□ 0.26
SRPK1-201ENST00000346162 PBKQ96KB5 322 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 CRKP46108 304 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 MESDQ14696 234 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 TBC1D10BQ4KMP7 808 aaPredicted RBP16.65■□□□□ 0.26
SRPK1-201ENST00000346162 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 MYCBPAPQ8TBZ2 947 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
SRPK1-201ENST00000346162 NT5C1BQ96P26 610 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 TMEM260Q9NX78 707 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 GFPT2O94808 682 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
SRPK1-201ENST00000346162 ESRRGP62508 458 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 LGSNQ5TDP6 509 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 MYBL1P10243 752 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
SRPK1-201ENST00000346162 ARHGAP22Q7Z5H3 698 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 SPZ1Q9BXG8 430 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
SRPK1-201ENST00000346162 ZFXP17010 805 aaPredicted RBP16.64■□□□□ 0.25
SRPK1-201ENST00000346162 FAM47EQ6ZV65 393 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 AP1M1Q9BXS5 423 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 PCIF1Q9H4Z3 704 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 ESRRAP11474 423 aaPredicted RBP16.64■□□□□ 0.25
SRPK1-201ENST00000346162 SNX1Q13596 522 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 PREPLQ4J6C6 727 aaPredicted RBP16.64■□□□□ 0.25
SRPK1-201ENST00000346162 MIGA2Q7L4E1 593 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 ACCSQ96QU6 501 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 PHF20Q9BVI0 1012 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 KCNA3P22001 575 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 MFAP3P55082 362 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 OLFML2BQ68BL8 750 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 RSRC2Q7L4I2 434 aaKnown RBP16.64■□□□□ 0.25
SRPK1-201ENST00000346162 PASKQ96RG2 1323 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 SNX16P57768 344 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 GPSM2P81274 684 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.25
SRPK1-201ENST00000346162 EGFL6Q8IUX8 553 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 TBK1Q9UHD2 729 aa16.64■□□□□ 0.25
SRPK1-201ENST00000346162 ARHGEF28Q8N1W1 1705 aaKnown RBP16.63■□□□□ 0.25
SRPK1-201ENST00000346162 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 PTK2Q05397 1052 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 GRAMD1BQ3KR37 738 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 NFRKBQ6P4R8 1299 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 GRK7Q8WTQ7 553 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 DCAF4Q8WV16 495 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 DNAJC9Q8WXX5 260 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 GYG2O15488 501 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
SRPK1-201ENST00000346162 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
SRPK1-201ENST00000346162 ADCY2Q08462 1091 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 ORC2Q13416 577 aaPredicted RBP16.63■□□□□ 0.25
SRPK1-201ENST00000346162 ALKBH5Q6P6C2 394 aaKnown RBP16.63■□□□□ 0.25
SRPK1-201ENST00000346162 CAPN12Q6ZSI9 719 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 ENGASEQ8NFI3 743 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 ZIM3Q96PE6 472 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms