RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SKIV2LQ15477 1246 aaKnown RBP16.26■□□□□ 0.19
HMGN3-202ENST00000344726 NME8Q8N427 588 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
HMGN3-202ENST00000344726 FAM167AQ96KS9 214 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 VAV3Q9UKW4 847 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 SQORQ9Y6N5 450 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 ADGRA3Q8IWK6 1321 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 M0QZ92 97 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 GCFC2P16383 781 aaKnown RBP16.25■□□□□ 0.19
HMGN3-202ENST00000344726 CLCN3P51790 818 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 TMEM192Q8IY95 271 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
HMGN3-202ENST00000344726 ERVK-5Q9HDB9 667 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 LMCD1Q9NZU5 365 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 GINS2Q9Y248 185 aa16.25■□□□□ 0.19
HMGN3-202ENST00000344726 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
HMGN3-202ENST00000344726 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 GPR32O75388 356 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 DGKIO75912 1065 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 VTNP04004 478 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 BMP1P13497 986 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 PAK2Q13177 524 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 LRRC71Q8N4P6 559 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 METTL13Q8N6R0 699 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 ADAMTS19Q8TE59 1207 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 FAM20AQ96MK3 541 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 OSMRQ99650 979 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 CEP131Q9UPN4 1083 aa16.24■□□□□ 0.19
HMGN3-202ENST00000344726 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
HMGN3-202ENST00000344726 H3BNC9 293 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 GATMP50440 423 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 SPIRE1Q08AE8 756 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
HMGN3-202ENST00000344726 NRBP2Q9NSY0 501 aa16.23■□□□□ 0.19
HMGN3-202ENST00000344726 TBX3O15119 743 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 MAGEB2O15479 319 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 NFX1Q12986 1120 aaKnown RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 GPM6BQ13491 265 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 MTERF2Q49AM1 385 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 XKR3Q5GH77 459 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 FAM228AQ86W67 206 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 CLP1Q92989 425 aaKnown RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 ZNF668Q96K58 619 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 SAMD11Q96NU1 681 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 NAP1L4Q99733 375 aaKnown RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
HMGN3-202ENST00000344726 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-202ENST00000344726 C5orf67F2Z3F1 127 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 RPS6KA5O75582 802 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 CTNNB1P35222 781 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 BMPR1AP36894 532 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-202ENST00000344726 PSMC5P62195 406 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 DRP2Q13474 957 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 TRIM29Q14134 588 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 BTG3Q14201 252 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-202ENST00000344726 ANO5Q75V66 913 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 HLA-CQ95604 372 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 MRPL38Q96DV4 380 aaKnown RBP16.21■□□□□ 0.19
HMGN3-202ENST00000344726 ADAMTS10Q9H324 1103 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-202ENST00000344726 ST3GAL5Q9UNP4 418 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 COG5Q9UP83 839 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 AKT3Q9Y243 479 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 MRPL42Q9Y6G3 142 aaKnown RBP16.21■□□□□ 0.19
HMGN3-202ENST00000344726 BDP1A6H8Y1 2624 aa16.21■□□□□ 0.19
HMGN3-202ENST00000344726 NCOR1O75376 2440 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 DDX11L8A8MPP1 907 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 GRM6O15303 877 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
HMGN3-202ENST00000344726 IBSPP21815 317 aaPredicted RBP16.2■□□□□ 0.18
HMGN3-202ENST00000344726 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
HMGN3-202ENST00000344726 TBC1D8BQ0IIM8 1120 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 RABEP1Q15276 862 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 PAN2Q504Q3 1202 aaKnown RBP16.2■□□□□ 0.18
HMGN3-202ENST00000344726 PLA2G4FQ68DD2 849 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
HMGN3-202ENST00000344726 UHRF1Q96T88 793 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms