RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 AGGF1Q8N302 714 aaeCLIP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PYROXD1Q8WU10 500 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TMBIM4Q9HC24 238 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 H0YCG3 227 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RAD51CO43502 376 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SLC26A4O43511 780 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PI16Q6UXB8 463 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RNF207Q6ZRF8 634 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 DNAJC10Q8IXB1 793 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SRRM1Q8IYB3 904 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 NRBF2Q96F24 287 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 MCF2LO15068 1137 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 NCK2O43639 380 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 GHRP10912 638 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ITIH2P19823 946 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 MRPS25P82663 173 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RASGRF1Q13972 1273 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ICA1LQ8NDH6 482 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CCDC68Q9H2F9 335 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 HPS5Q9UPZ3 1129 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 JAG2Q9Y219 1238 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF804BA4D1E1 1349 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ORC4O43929 436 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CCDC22O60826 627 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CFBP00751 764 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 GARSP41250 739 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RCN2Q14257 317 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CDKAL1Q5VV42 579 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 CRLF3Q8IUI8 442 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 EIF1ADQ8N9N8 165 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 NUDCD1Q96RS6 583 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TRAIPQ9BWF2 469 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TMOD4Q9NZQ9 345 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 COMMD10Q9Y6G5 202 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SCINQ9Y6U3 715 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PHF20L1A8MW92 1017 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 HSD17B3P37058 310 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 RPS8P62241 208 aaKnown RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PABPC4Q13310 644 aaKnown RBP eCLIP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PDIA5Q14554 519 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 PDXDC1Q6P996 788 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 DPH6Q7L8W6 267 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ACTRT1Q8TDG2 376 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SSX2IPQ9Y2D8 614 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 GSG1L2A8MUP6 293 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 H0Y3Z8 333 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TNFRSF8P28908 595 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 GUCY1A2P33402 732 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 SEC24CP53992 1094 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 MDM2Q00987 491 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-203ENST00000343508 TMED1Q13445 227 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 BIRC2Q13490 618 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 KIAA1755Q5JYT7 1200 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 ATG9AQ7Z3C6 839 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 FBXO11Q86XK2 927 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 AMNQ9BXJ7 453 aa5.14□□□□□ -1.59
CSMD3-203ENST00000343508 MYH15Q9Y2K3 1946 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CLIC2O15247 247 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PHF2O75151 1096 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PIK3CAP42336 1068 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 KLHL38Q2WGJ6 581 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CYP4F22Q6NT55 531 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LRRC47Q8N1G4 583 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SERPINB12Q96P63 405 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CSRNP1Q96S65 589 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 ERP44Q9BS26 406 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SEL1LQ9UBV2 794 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 INTUQ9ULD6 942 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 TCP11X1B4DZS4 312 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 P4HA1P13674 534 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PLS3P13797 630 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 DYNLL1P63167 89 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 AP3B2Q13367 1082 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CAPN12Q6ZSI9 719 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 POMGNT1Q8WZA1 660 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SUCLA2Q9P2R7 463 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LRRN4CLQ8ND94 238 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 CCDC17Q96LX7 622 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LRGUKQ96M69 825 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 DDX39AO00148 427 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 DIAPH2O60879 1101 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 RTN2O75298 545 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PDIK1LQ8N165 341 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 NSMCE1Q8WV22 266 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 ACSBG1Q96GR2 724 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 RBM41Q96IZ5 413 aaKnown RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 TRPC6Q9Y210 931 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 FAM237AA0A1B0GTK4 181 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 LIG4P49917 911 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 COASYQ13057 564 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SLC29A2Q14542 456 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PNMA6FA0A0J9YX94 578 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 ARHGAP10A1A4S6 786 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 USP11P51784 963 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 SKOR1P84550 965 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 ASPHQ12797 758 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 PDE1CQ14123 709 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-203ENST00000343508 DAB2IPQ5VWQ8 1189 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 KCTD17Q8N5Z5 321 aa5.13□□□□□ -1.59
CSMD3-203ENST00000343508 XPO6Q96QU8 1125 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms