RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 DYNLT1P63172 113 aa18.77■□□□□ 0.59
SMAD4-201ENST00000342988 YIPF3Q9GZM5 350 aa18.77■□□□□ 0.59
SMAD4-201ENST00000342988 ZYXQ15942 572 aaKnown RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 COPS6Q7L5N1 327 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 KRT73Q86Y46 540 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 THEM5Q8N1Q8 247 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 FAF2Q96CS3 445 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 DYRK4Q9NR20 520 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 HPS5Q9UPZ3 1129 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 TESK2Q96S53 571 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 KIFC1Q9BW19 673 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 SPRTNQ9H040 489 aaPredicted RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 KRT84Q9NSB2 600 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 EGFL8Q99944 293 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 AP5M1Q9H0R1 490 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 SLITRK6Q9H5Y7 841 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 ARPP21Q9UBL0 812 aaPredicted RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 SRPRBQ9Y5M8 271 aaKnown RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 NCF4Q15080 339 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 LRRC31Q6UY01 552 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 TAB3Q8N5C8 712 aaPredicted RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 XPO6Q96QU8 1125 aaKnown RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 KLHL18O94889 574 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 APPBP2Q92624 585 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 CCDC127Q96BQ5 260 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 TMEM206Q9H813 350 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 RWDD3Q9Y3V2 267 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 RASA4BC9J798 803 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 RASA4O43374 803 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 PEX1O43933 1283 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 CLEC4FQ8N1N0 589 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
SMAD4-201ENST00000342988 PIK3R5Q8WYR1 880 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
SMAD4-201ENST00000342988 RASSF3Q86WH2 238 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 MOSPD2Q8NHP6 518 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMAD4-201ENST00000342988 PCDHA5Q9Y5H7 936 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 AP3B1O00203 1094 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 CAPN1P07384 714 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 CSE1LP55060 971 aaKnown RBP18.75■□□□□ 0.59
SMAD4-201ENST00000342988 NAA35Q5VZE5 725 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 NIM1KQ8IY84 436 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 SH3TC2Q8TF17 1288 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
SMAD4-201ENST00000342988 SLC7A3Q8WY07 619 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 COPG2Q9UBF2 871 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 CDH24Q86UP0 819 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 CYGBQ8WWM9 190 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 CTTNQ14247 550 aaKnown RBP18.75■□□□□ 0.59
SMAD4-201ENST00000342988 TFCP2Q12800 502 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 SRLQ86TD4 932 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 TBC1D1Q86TI0 1168 aaPredicted RBP18.75■□□□□ 0.59
SMAD4-201ENST00000342988 TTC13Q8NBP0 860 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 RAD21L1Q9H4I0 556 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 AURKCQ9UQB9 309 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 C20orf194Q5TEA3 1177 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 BBS2Q9BXC9 721 aa18.75■□□□□ 0.59
SMAD4-201ENST00000342988 DYTNA2CJ06 578 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 MYL1P05976 194 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 EMBQ6PCB8 327 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 FAM45AQ8TCE6 357 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 TECP42680 631 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ALCAMQ13740 583 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ZNF544Q6NX49 715 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 GRAMD1AQ96CP6 724 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ZNF839A8K0R7 811 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 SLC27A2O14975 620 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 TALDO1P37837 337 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 KLHL12Q53G59 568 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 C19orf18Q8NEA5 215 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ZBTB33Q86T24 672 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 MRPL1Q9BYD6 325 aaKnown RBP18.74■□□□□ 0.59
SMAD4-201ENST00000342988 KLHL8Q9P2G9 620 aaPredicted RBP18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
SMAD4-201ENST00000342988 USP39Q53GS9 565 aaKnown RBP18.74■□□□□ 0.59
SMAD4-201ENST00000342988 PI4K2BQ8TCG2 481 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 CDHR1Q96JP9 859 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 ACSL3O95573 720 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 OR52Z1P0C646 297 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 CCNA1P78396 465 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 NEK10Q6ZWH5 1172 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 GALNT8Q9NY28 637 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
SMAD4-201ENST00000342988 RGS5O15539 181 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 GPAA1O43292 621 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 CENPAP49450 140 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 ETF1P62495 437 aaKnown RBP18.73■□□□□ 0.59
SMAD4-201ENST00000342988 TRAPPC3LQ5T215 181 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 OSBPL1AQ9BXW6 950 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 H0YIN7 160 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 THEMIS2Q5TEJ8 643 aa18.73■□□□□ 0.59
SMAD4-201ENST00000342988 AK8Q96MA6 479 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms