RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 CTTNBP2NLQ9P2B4 639 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 GGT7Q9UJ14 662 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 PNMA2Q9UL42 364 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
CPSF7-201ENST00000340437 HSPA9P38646 679 aaKnown RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 MCTP2Q6DN12 878 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 KCNV1Q6PIU1 500 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 FBXO11Q86XK2 927 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 SLFN12Q8IYM2 578 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 MGARPQ8TDB4 240 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 DNAJC17Q9NVM6 304 aaKnown RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 GMNCA6NCL1 334 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 IL1R1P14778 569 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 ICA1Q05084 483 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 CCDC38Q502W7 563 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 SLC35C1Q96A29 364 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 EIF2AK1Q9BQI3 630 aaKnown RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 KDM4FA0A1W2PPD8 638 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 ATMINO43313 823 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 EXOC3O60645 756 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 SPATA31C1P0DKV0 1188 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 RDXP35241 583 aaKnown RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 CLK2P49760 499 aaKnown RBP15.64■□□□□ 0.09
CPSF7-201ENST00000340437 RUFY4Q6ZNE9 571 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 FRMD5Q7Z6J6 570 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 ARHGEF26Q96DR7 871 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 DYDC2Q96IM9 177 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 THAP2Q9H0W7 228 aa15.64■□□□□ 0.09
CPSF7-201ENST00000340437 IGSF9BQ9UPX0 1349 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 ADCY1Q08828 1119 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 MESDQ14696 234 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 EPHA7Q15375 998 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 UTRNP46939 3433 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 DDTLA6NHG4 134 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 F5H6K3 240 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 MEIS2O14770 477 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 MSH4O15457 936 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 GUCY2CP25092 1073 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 TNFRSF8P28908 595 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 KLRC3Q07444 240 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 EDRF1Q3B7T1 1238 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 LNX1Q8TBB1 728 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 SCFD2Q8WU76 684 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 RUBCNQ92622 972 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 ACP6Q9NPH0 428 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 CTNND1O60716 968 aaKnown RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 SHBGP04278 402 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 GABPAQ06546 454 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 CUL1Q13616 776 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 E2F5Q15329 346 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 RAPGEF5Q92565 580 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 TEKT1Q969V4 418 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 FMO2Q99518 471 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 AMNQ9BXJ7 453 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 MLXIPLQ9NP71 852 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 PLCB1Q9NQ66 1216 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 BZW2Q9Y6E2 419 aaKnown RBP15.63■□□□□ 0.09
CPSF7-201ENST00000340437 SCN7AQ01118 1682 aa15.63■□□□□ 0.09
CPSF7-201ENST00000340437 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 TISP43B9A030 160 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 CAND2O75155 1236 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 FAM107AO95990 144 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 PPP2R2AP63151 447 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 LRRC57Q8N9N7 239 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 TYW1Q9NV66 732 aaKnown RBP15.62■□□□□ 0.09
CPSF7-201ENST00000340437 DDX20Q9UHI6 824 aaKnown RBP15.62■□□□□ 0.09
CPSF7-201ENST00000340437 ASTN1O14525 1302 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 SNHG28P0DPA3 235 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 ECHS1P30084 290 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 DR1Q01658 176 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 BARGINQ6ZT62 677 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 NT5DC3Q86UY8 548 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 SYT2Q8N9I0 419 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-201ENST00000340437 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 DAAM1Q9Y4D1 1078 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 CBWD6Q4V339 395 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 CBWD3Q5JTY5 395 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 CBWD5Q5RIA9 395 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 OTUD6AQ7L8S5 288 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 HS2ST1Q7LGA3 356 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 FAM178BQ8IXR5 827 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 CCDC13Q8IYE1 715 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 BTBD6Q96KE9 485 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 HAUS2Q9NVX0 235 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 FRMD4BQ9Y2L6 1034 aa15.62■□□□□ 0.09
CPSF7-201ENST00000340437 MYH1P12882 1939 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 VIMP08670 466 aaKnown RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 RBM26Q5T8P6 1007 aaKnown RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 SLC20A1Q8WUM9 679 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms