RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ITGA7Q13683 1181 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 POSTNQ15063 836 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 SLC43A3Q8NBI5 491 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 MCPH1Q8NEM0 835 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 LMBR1Q8WVP7 490 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 ATP6V0A4Q9HBG4 840 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 STARD7Q9NQZ5 370 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 GTF2IRD1Q9UHL9 959 aa19.87■□□□□ 0.77
SDCBP2-201ENST00000339987 IGKV6-21A0A0C4DH24 114 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 A0A0U1RQG5 324 aaPredicted RBP19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 MBLAC1A4D2B0 266 aaPredicted RBP19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 GNAT1P11488 350 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 POLGP54098 1239 aaPredicted RBP19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 EMC2Q15006 297 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 CCDC183Q5T5S1 534 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 TRAPPC12Q8WVT3 735 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 DDX12PQ92771 950 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 VTI1AQ96AJ9 217 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 XPNPEP1Q9NQW7 623 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 SETD4Q9NVD3 440 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 KAT6AQ92794 2004 aa19.86■□□□□ 0.77
SDCBP2-201ENST00000339987 C17orf102A2RUQ5 167 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 KRT18P05783 430 aaKnown RBP19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 PRR29P0C7W0 189 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 KLRC1P26715 233 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 IGBP1P78318 339 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 DPYDQ12882 1025 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 CUL4BQ13620 913 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 MARCH8Q5T0T0 291 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 MTHFD1LQ6UB35 978 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 DNAJC19Q96DA6 116 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 ODF2LQ9ULJ1 636 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 COL6A1P12109 1028 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 GIT2Q14161 759 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 CAVIN1Q6NZI2 390 aaKnown RBP19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 LINC01465Q8N7H1 131 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 RETREG2Q8NC44 543 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 REEP2Q9BRK0 252 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 TMEM63CQ9P1W3 806 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 TUBE1Q9UJT0 475 aa19.85■□□□□ 0.77
SDCBP2-201ENST00000339987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 NPHP3-ACAD11A0A0J9YXS1 232 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 PVALEFA0A1B0GWK0 134 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 ASIC1P78348 528 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 MAPK7Q13164 816 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 PNOCQ13519 176 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 HIC1Q14526 733 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 CAMK4Q16566 473 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 FAM47CQ5HY64 1035 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 DYMQ7RTS9 669 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 SPATA20Q8TB22 786 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 PPP1R13LQ8WUF5 828 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 TCP11Q8WWU5 503 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 BLZF1Q9H2G9 400 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 PCDHA2Q9Y5H9 948 aa19.84■□□□□ 0.77
SDCBP2-201ENST00000339987 FRMD3A2A2Y4 597 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 ARVCFO00192 962 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 HIP1RO75146 1068 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 SMC2O95347 1197 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 CASP1P29466 404 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 CDK7P50613 346 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 IER5Q5VY09 327 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 GDF6Q6KF10 455 aaPredicted RBP19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 RBM43Q6ZSC3 357 aaKnown RBP19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 UNC13DQ70J99 1090 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 DAW1Q8N136 415 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 KIFAP3Q92845 792 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 DRC1Q96MC2 740 aa19.83■□□□□ 0.76
SDCBP2-201ENST00000339987 KIAA0100Q14667 2235 aaKnown RBP19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 KLRC4O43908 158 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 TBCAO75347 108 aaKnown RBP19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 DNM2P50570 870 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 ZNF131P52739 623 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 RTP1P59025 263 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 RAD51AP2Q09MP3 1159 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 EFCAB12Q6NXP0 572 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 CCDC65Q8IXS2 484 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 DIS3LQ8TF46 1054 aaKnown RBP19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 SENP6Q9GZR1 1112 aaPredicted RBP19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 KIAA1468Q9P260 1216 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 PCDHA5Q9Y5H7 936 aa19.82■□□□□ 0.76
SDCBP2-201ENST00000339987 SMIM35A0A1B0GVV1 85 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 TREHO43280 583 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 RPN1P04843 607 aaKnown RBP19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 CYP2C9P11712 490 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 GAP43P17677 238 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 TMOD1P28289 359 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 ARL2P36404 184 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 SARSP49591 514 aaKnown RBP19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 ZNF200P98182 395 aaPredicted RBP19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 MKRN4PQ13434 485 aaPredicted RBP19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 KCNB1Q14721 858 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 FAM102BQ5T8I3 360 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 NT5DC1Q5TFE4 455 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 C1orf53Q5VUE5 145 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 TAF2Q6P1X5 1199 aa19.81■□□□□ 0.76
SDCBP2-201ENST00000339987 MAEAQ7L5Y9 396 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms