RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ANKFY1Q9P2R3 1169 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 ANO9A1A5B4 782 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 TLR2O60603 784 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 MYL1P05976 194 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 STXBP4Q6ZWJ1 553 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 SHMT1P34896 483 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 DDR1Q08345 913 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 SEZ6Q53EL9 994 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 KAT5Q92993 513 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
USP1-201ENST00000339950 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
USP1-201ENST00000339950 DAAM1Q9Y4D1 1078 aa12.95□□□□□ -0.34
USP1-201ENST00000339950 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 RGS16O15492 202 aaPredicted RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 FTLP02792 175 aaPredicted RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 PSMC2P35998 433 aaKnown RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 STAT2P52630 851 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 CALCOCO2Q13137 446 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 ANKS1AQ92625 1134 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 ZNF653Q96CK0 615 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 TTC7AQ9ULT0 858 aaPredicted RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 MYH8P13535 1937 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 ABCC6O95255 1503 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 GRID2IPA4D2P6 1211 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 MSH4O15457 936 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 ECE2O60344 883 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 LRRC45Q96CN5 670 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 TAS2R14Q9NYV8 317 aa12.94□□□□□ -0.34
USP1-201ENST00000339950 DBR1Q9UK59 544 aaKnown RBP12.94□□□□□ -0.34
USP1-201ENST00000339950 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
USP1-201ENST00000339950 CYP26A1O43174 497 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 GNA14O95837 355 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 ARP10275 920 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 MAGEA9P43362 315 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 WDR93Q6P2C0 686 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 SLC35G2Q8TBE7 412 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 POMGNT1Q8WZA1 660 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 NAGPAQ9UK23 515 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 TAF1P21675 1872 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 YY1P25490 414 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 PPP4CP60510 307 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 DYNLT1P63172 113 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 LRRC55Q6ZSA7 311 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 KIRREL3Q8IZU9 778 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 LXNQ9BS40 222 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 ZNF341Q9BYN7 854 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 PNMA2Q9UL42 364 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 PON1P27169 355 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 FLT3P36888 993 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 ELAC2Q9BQ52 826 aaKnown RBP12.93□□□□□ -0.34
USP1-201ENST00000339950 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 PRR12Q9ULL5 1215 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
USP1-201ENST00000339950 ATRNO75882 1429 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 PIAS1O75925 651 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 CD58P19256 250 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 EMBQ6PCB8 327 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 TADA2BQ86TJ2 420 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 ACSF2Q96CM8 615 aaPredicted RBP12.92□□□□□ -0.34
USP1-201ENST00000339950 FMO2Q99518 471 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 GLIS2Q9BZE0 524 aaPredicted RBP12.92□□□□□ -0.34
USP1-201ENST00000339950 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 AFF2P51816 1311 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 FOXN3O00409 490 aaPredicted RBP12.92□□□□□ -0.34
USP1-201ENST00000339950 HNRNPDLO14979 420 aaKnown RBP12.92□□□□□ -0.34
USP1-201ENST00000339950 TTMPQ5BVD1 217 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 RPUSD2Q8IZ73 545 aaKnown RBP12.92□□□□□ -0.34
USP1-201ENST00000339950 BAP1Q92560 729 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 DNAJC19Q96DA6 116 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 HIP1RO75146 1068 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 DR1Q01658 176 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 GIT2Q14161 759 aa12.92□□□□□ -0.34
USP1-201ENST00000339950 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms