RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MIIPQ5JXC2 388 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 CCDC137Q6PK04 289 aaKnown RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 FAM187AA6NFU0 413 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 CAPRIN2Q6IMN6 1127 aaKnown RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 TAB3Q8N5C8 712 aaPredicted RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SLC35G2Q8TBE7 412 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 ANO3Q9BYT9 981 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SYNGAP1Q96PV0 1343 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 EVI5O60447 810 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 SCNN1DP51172 638 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 RBBP5Q15291 538 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ZNF662Q6ZS27 426 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TXLNGQ9NUQ3 528 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 UBXN2AP68543 259 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 FUKQ8N0W3 1084 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ERP44Q9BS26 406 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 SLC37A4O43826 429 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 FECHP22830 423 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 STRN3Q13033 797 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ORC2Q13416 577 aaPredicted RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 CEP128Q6ZU80 1094 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 DHX36Q9H2U1 1008 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 FGFR1OP2Q9NVK5 253 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 DIS3Q9Y2L1 958 aaKnown RBP13.44□□□□□ -0.26
RIOK3-201ENST00000339486 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
RIOK3-201ENST00000339486 MIF4GDA9UHW6 222 aaKnown RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 PDHA1P08559 390 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 CHRNA3P32297 505 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 SNAP25P60880 206 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 SP4Q02446 784 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 FUT2Q10981 343 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 LIN9Q5TKA1 542 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 KAZNQ674X7 775 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.264e-9■■□□□ 12.7
RIOK3-201ENST00000339486 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 SERPINB13Q9UIV8 391 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 PJA2O43164 708 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 ARMC2Q8NEN0 867 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 PARVGQ9HBI0 331 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 DONSONQ9NYP3 566 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 ENO4A6NNW6 628 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 AGTP01019 485 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 GAP43P17677 238 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 KLRK1P26718 216 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 MAPK4P31152 587 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 LONRF1Q17RB8 773 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 PPP1R21Q6ZMI0 780 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 TGS1Q96RS0 853 aaKnown RBP13.43□□□□□ -0.26
RIOK3-201ENST00000339486 FNBP1Q96RU3 617 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
RIOK3-201ENST00000339486 WDR91A4D1P6 747 aa13.42□□□□□ -0.26
RIOK3-201ENST00000339486 ATP2A2P16615 1042 aaKnown RBP13.42□□□□□ -0.26
RIOK3-201ENST00000339486 EVX2Q03828 476 aa13.42□□□□□ -0.26
RIOK3-201ENST00000339486 DHX34Q14147 1143 aaKnown RBP13.42□□□□□ -0.26
RIOK3-201ENST00000339486 ZNF571Q7Z3V5 609 aaPredicted RBP13.42□□□□□ -0.26
RIOK3-201ENST00000339486 GLIS3Q8NEA6 775 aa13.42□□□□□ -0.26
RIOK3-201ENST00000339486 USP15Q9Y4E8 981 aaPredicted RBP13.42□□□□□ -0.26
RIOK3-201ENST00000339486 CIB2O75838 187 aa13.42□□□□□ -0.26
RIOK3-201ENST00000339486 CA4P22748 312 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms