RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TBKBP1A7MCY6 615 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 ZBTB42B2RXF5 422 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 GPR182O15218 404 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 GLP2RO95838 553 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 UBE3AQ05086 875 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 COASYQ13057 564 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 BMP2KLQ5H9B9 411 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 SWSAP1Q6NVH7 229 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 MFSD14AQ96MC6 490 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 FBXL18Q96ME1 805 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 TLE6Q9H808 572 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 TLR9Q9NR96 1032 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 RGS18Q9NS28 235 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 BARX2Q9UMQ3 279 aaPredicted RBP17.75■□□□□ 0.43
LINC01116-202ENST00000339037 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 TECTAO75443 2155 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 LOXHD1Q8IVV2 1947 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 IGLV3-22A0A075B6J6 115 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 DHX15O43143 795 aaKnown RBP17.74■□□□□ 0.43
LINC01116-202ENST00000339037 RCAN1P53805 252 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 NHLH1Q02575 133 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 KIZQ2M2Z5 673 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 EDAQ92838 391 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 PPP1R16BQ96T49 567 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 OSMRQ99650 979 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 ZNF577Q9BSK1 485 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 TCEAL9Q9UHQ7 104 aa17.74■□□□□ 0.43
LINC01116-202ENST00000339037 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 C9IYK1 514 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 FGF18O76093 207 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 C22orf31O95567 290 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 CDC27P30260 824 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 CRYBB1P53674 252 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 SETQ01105 290 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 KRT32Q14532 448 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 PFKFB3Q16875 520 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 THNSL1Q8IYQ7 743 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 METTL13Q8N6R0 699 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 CRYGNQ8WXF5 182 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 FAM217BQ9NTX9 383 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
LINC01116-202ENST00000339037 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 USP15Q9Y4E8 981 aaPredicted RBP17.73■□□□□ 0.43
LINC01116-202ENST00000339037 LOC730098B7Z3J9 87 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 PER2O15055 1255 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 VTNP04004 478 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 CYP3A4P08684 503 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 ATP4AP20648 1035 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 MRE11P49959 708 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 FGD1P98174 961 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 TSGA10IPQ3SY00 556 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 ZNF746Q6NUN9 644 aaPredicted RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 TRMT1LQ7Z2T5 733 aaKnown RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 FAM228AQ86W67 206 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 SMAP1Q8IYB5 467 aaPredicted RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 EFCAB3Q8N7B9 438 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 ATP6V0A4Q9HBG4 840 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 HCSTQ9UBK5 93 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
LINC01116-202ENST00000339037 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
LINC01116-202ENST00000339037 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 ESYT2A0FGR8 921 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 PSAPP07602 524 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 FGFR1P11362 822 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 ERVFC1P60507 584 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 PDE12Q6L8Q7 609 aaKnown RBP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 COLGALT1Q8NBJ5 622 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
LINC01116-202ENST00000339037 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 CFAP54Q96N23 3096 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
LINC01116-202ENST00000339037 GPR32O75388 356 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 LAG3P18627 525 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 FAM189BP81408 668 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 RBM10P98175 930 aaKnown RBP17.7■□□□□ 0.42
LINC01116-202ENST00000339037 CBX2Q14781 532 aaPredicted RBP17.7■□□□□ 0.42
LINC01116-202ENST00000339037 DUSP6Q16828 381 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 TRIM67Q6ZTA4 783 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 VN1R2Q8NFZ6 395 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 ELAC1Q9H777 363 aaKnown RBP17.7■□□□□ 0.42
LINC01116-202ENST00000339037 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 SAMM50Q9Y512 469 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 PCDHA10Q9Y5I2 948 aa17.7■□□□□ 0.42
LINC01116-202ENST00000339037 CACNA1HO95180 2353 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 FNDC1Q4ZHG4 1894 aaPredicted RBP17.69■□□□□ 0.42
LINC01116-202ENST00000339037 TMEM221A6NGB7 291 aa17.69■□□□□ 0.42
LINC01116-202ENST00000339037 M0R296 226 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms