RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 GPC3P51654 580 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 GNGT1P63211 74 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 TSPY1Q01534 308 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 TCP11X2Q5H9J9 407 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 C11orf57Q6ZUT1 292 aaPredicted RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PRPF38AQ8NAV1 312 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PIGOQ8TEQ8 1089 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 AIFM3Q96NN9 605 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 HAUS8Q9BT25 410 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 NHEJ1Q9H9Q4 299 aaPredicted RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 SMYD2Q9NRG4 433 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 RNF14Q9UBS8 474 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 CDC23Q9UJX2 597 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 USH1CQ9Y6N9 552 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 TFRCP02786 760 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 MMP14P50281 582 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 TWF2Q6IBS0 349 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 CYB5R4Q7L1T6 521 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 RNF10Q8N5U6 811 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 UHMK1Q8TAS1 419 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 RAD54LQ92698 747 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 ATP6V1E2Q96A05 226 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 MXD3Q9BW11 206 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 BAG5Q9UL15 447 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 ASB14A6NK59 587 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PPARGP37231 505 aaPredicted RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 FCGRTP55899 365 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF568Q3ZCX4 644 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 AGBL3Q8NEM8 1001 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 TNS2Q63HR2 1409 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 GPC4O75487 556 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 SLC4A1P02730 911 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 EIF4A3P38919 411 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 MMEL1Q495T6 779 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 NOP9Q86U38 636 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PSPC1Q8WXF1 523 aaKnown RBP8.31□□□□□ -1.08
TRIM2-201ENST00000338700 HVCN1Q96D96 273 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 PCDHA13Q9Y5I0 950 aa8.31□□□□□ -1.08
TRIM2-201ENST00000338700 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 TXNDC9O14530 226 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 HUS1O60921 280 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 LARGE1O95461 756 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 MSH2P43246 934 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 IL9RQ01113 521 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GOLGA8FQ08AF8 430 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GOLGA8DPQ0D2H9 430 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ENAHQ8N8S7 591 aaPredicted RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 RBM46Q8TBY0 533 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 DYDC2Q96IM9 177 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GBA2Q9HCG7 927 aaPredicted RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 CCL15-CCL14A0A0B4J2E2 113 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 P4HBP07237 508 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GTF2A2P52657 109 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 BASP1P80723 227 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 CCL15Q16663 113 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF579Q8NAF0 562 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 INPP5FQ9Y2H2 1132 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ARHGAP23Q9P227 1491 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 LRRD1A4D1F6 860 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 MOCS3O95396 460 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 SF3A3Q12874 501 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 KCNV1Q6PIU1 500 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ANKRD13AQ8IZ07 590 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ADGRF4Q8IZF3 695 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 MB21D1Q8N884 522 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 SAMSN1Q9NSI8 373 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 TLK1Q9UKI8 766 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 F5H6K3 240 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF18P17022 549 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 STX1BP61266 288 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 KLRC3Q07444 240 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 PROM2Q8N271 834 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GANCQ8TET4 914 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 LY9Q9HBG7 655 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 SPATS2LQ9NUQ6 558 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 PSMA2P25787 234 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 QARSP47897 775 aaKnown RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 COG7P83436 770 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 FOXO4P98177 505 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 ZNF699Q32M78 642 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 RHOT2Q8IXI1 618 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 SPATA33Q96N06 139 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 GCOM2Q9BZD3 368 aaPredicted RBP8.3□□□□□ -1.08
TRIM2-201ENST00000338700 SLITRK6Q9H5Y7 841 aa8.3□□□□□ -1.08
TRIM2-201ENST00000338700 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms