RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SYNE3Q6ZMZ3 975 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
CSMD2-202ENST00000338325 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.32
CSMD2-202ENST00000338325 OSMRQ99650 979 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 S1PR5Q9H228 398 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 ENTPD7Q9NQZ7 604 aa13.08□□□□□ -0.32
CSMD2-202ENST00000338325 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
CSMD2-202ENST00000338325 C22orf31O95567 290 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 FAM189BP81408 668 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 MIS18BP1Q6P0N0 1132 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 PPP1R16BQ96T49 567 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
CSMD2-202ENST00000338325 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
CSMD2-202ENST00000338325 SMCO2A6NFE2 343 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 HOXA2O43364 376 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 VTNP04004 478 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
CSMD2-202ENST00000338325 AVPR2P30518 371 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
CSMD2-202ENST00000338325 DSC3Q14574 896 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 LLGL2Q6P1M3 1020 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 APOA5Q6Q788 366 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 ZBTB33Q86T24 672 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 PLA2G4DQ86XP0 818 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 SNX27Q96L92 541 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 APOL5Q9BWW9 433 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 NGRNQ9NPE2 291 aaKnown RBP13.06□□□□□ -0.32
CSMD2-202ENST00000338325 FAM86C1Q9NVL1 165 aa13.06□□□□□ -0.32
CSMD2-202ENST00000338325 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 FAM86B1E9PN63 330 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
CSMD2-202ENST00000338325 GPR32O75388 356 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 FAM86B2P0C5J1 330 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 ATP4AP20648 1035 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 PPM1AP35813 382 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 FUT2Q10981 343 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 RTN1Q16799 776 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 CKAP2LQ8IYA6 745 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 METTL13Q8N6R0 699 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-202ENST00000338325 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
CSMD2-202ENST00000338325 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-202ENST00000338325 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 IPO5O00410 1097 aaKnown RBP13.04□□□□□ -0.32
CSMD2-202ENST00000338325 GFRA3O60609 400 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 SP100P23497 879 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-202ENST00000338325 KRT17Q04695 432 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 CASP10Q92851 521 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-202ENST00000338325 RIPOR3Q96MK2 946 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 ZNF577Q9BSK1 485 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-202ENST00000338325 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
CSMD2-202ENST00000338325 ZBTB43O43298 467 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 PBX3P40426 434 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 NUBP1P53384 320 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 SETQ01105 290 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TMC7Q7Z402 723 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TBC1D22BQ9NU19 505 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 GOLGA8AA7E2F4 631 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 GOLGA8BA8MQT2 603 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 MAGEB2O15479 319 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 PSAPP07602 524 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 CYP3A4P08684 503 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 CLCN3P51790 818 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
CSMD2-202ENST00000338325 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
CSMD2-202ENST00000338325 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms