RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GAS2O43903 313 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 CMA1P23946 247 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 FRMPD3Q5JV73 1810 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 SHC4Q6S5L8 630 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 RUFY4Q6ZNE9 571 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 TRIM43Q96BQ3 446 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 CTAGE1Q96RT6 745 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 PYM1Q9BRP8 204 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 PPP1R12CQ9BZL4 782 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 GDPD2Q9HCC8 539 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 ZMYND8Q9ULU4 1186 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 SCN10AQ9Y5Y9 1956 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 A0A1W2PQ27 194 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 A0A1W2PQ64 194 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 A0A1W2PQD8 194 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 ASAP2O43150 1006 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 CKBP12277 381 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 SELPP16109 830 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 CYP11B2P19099 503 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 PLCG1P19174 1290 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 CYP2C18P33260 490 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 RBL2Q08999 1139 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 POTEHQ6S545 545 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 SYT2Q8N9I0 419 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 MTRQ99707 1265 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 ATP6V0A4Q9HBG4 840 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 AKT3Q9Y243 479 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
SPTLC1-202ENST00000337841 IQCF3P0C7M6 154 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 SYN1P17600 705 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 STAT6P42226 847 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 CLCN3P51790 818 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 CCL23P55773 120 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 MRPS6P82932 125 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 EMC2Q15006 297 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 FAM26DQ5JW98 314 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 ZNF618Q5T7W0 954 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 SV2BQ7L1I2 683 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 KCNK18Q7Z418 384 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 PDILTQ8N807 584 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 PSPC1Q8WXF1 523 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 RAD54LQ92698 747 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 CELF4Q9BZC1 486 aaKnown RBP13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 LRRC27Q9C0I9 530 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
SPTLC1-202ENST00000337841 CENPFP49454 3210 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 RFC2P35250 354 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 DHX8Q14562 1220 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 FAM102BQ5T8I3 360 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 RINT1Q6NUQ1 792 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 LARP4BQ92615 738 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 BADQ92934 168 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 WNT8BQ93098 351 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 KCNG1Q9UIX4 513 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 TRPV2Q9Y5S1 764 aa13.23□□□□□ -0.29
SPTLC1-202ENST00000337841 H0YGN5 161 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 VTNP04004 478 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 CTSHP09668 335 aa13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 CRYBB1P53674 252 aaPredicted RBP13.22□□□□□ -0.29
SPTLC1-202ENST00000337841 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms