RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 LUC7LQ9NQ29 371 aaKnown RBP16.21■□□□□ 0.19
UBA1-201ENST00000335972 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
UBA1-201ENST00000335972 PSMD10O75832 226 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 PALB2Q86YC2 1186 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 LXNQ9BS40 222 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.19
UBA1-201ENST00000335972 VIPAS39Q9H9C1 493 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 PARVGQ9HBI0 331 aa16.21■□□□□ 0.19
UBA1-201ENST00000335972 RPL13P26373 211 aaKnown RBP16.21■□□□□ 0.18
UBA1-201ENST00000335972 HLTFQ14527 1009 aaKnown RBP eCLIP16.21■□□□□ 0.185e-6■■□□□ 12.8
UBA1-201ENST00000335972 LDHDQ86WU2 507 aa16.21■□□□□ 0.18
UBA1-201ENST00000335972 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.18
UBA1-201ENST00000335972 FAM84AQ96KN4 292 aa16.21■□□□□ 0.18
UBA1-201ENST00000335972 SPDYE2BA6NHP3 402 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 NFIBO00712 420 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 SPDYE6P0CI01 402 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 DLG4P78352 724 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 CEP55Q53EZ4 464 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 ZC3H3Q8IXZ2 948 aaKnown RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 ZIM3Q96PE6 472 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 POLR3CQ9BUI4 534 aaPredicted RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 WDR11Q9BZH6 1224 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 EVI5O60447 810 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 INPP5BP32019 993 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 USP8P40818 1118 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 IRX5P78411 483 aaPredicted RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 PRPF4BQ13523 1007 aaKnown RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 LLGL1Q15334 1064 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 INPP4AQ96PE3 977 aaPredicted RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 TRIM31Q9BZY9 425 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 COL20A1Q9P218 1284 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 DNAJC12Q9UKB3 198 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 PCDHGC5Q9Y5F6 944 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 ENTPD3O75355 529 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 PRELPP51888 382 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 DRAP1Q14919 205 aaPredicted RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 DAAM2Q86T65 1068 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 FAM76AQ8TAV0 307 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 LNX1Q8TBB1 728 aaPredicted RBP16.2■□□□□ 0.18
UBA1-201ENST00000335972 RUFY1Q96T51 708 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 PSD3Q9NYI0 1048 aa16.2■□□□□ 0.18
UBA1-201ENST00000335972 HIP1RO75146 1068 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 MMP14P50281 582 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 HDLBPQ00341 1268 aaKnown RBP16.19■□□□□ 0.18
UBA1-201ENST00000335972 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 IGSF9BQ9UPX0 1349 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 IPO5O00410 1097 aaKnown RBP16.19■□□□□ 0.18
UBA1-201ENST00000335972 EXOC3O60645 756 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 KIF4AO95239 1232 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
UBA1-201ENST00000335972 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 TMX2Q9Y320 296 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 PCNTO95613 3336 aa16.19■□□□□ 0.18
UBA1-201ENST00000335972 ARHGEF35A5YM69 484 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 GOLGA8IPA6NC78 632 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 GOLGA8JA6NMD2 632 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 ITGB5P18084 799 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 EPHB4P54760 987 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 GALCP54803 685 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 METTL13Q8N6R0 699 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 PSMC2P35998 433 aaKnown RBP16.18■□□□□ 0.18
UBA1-201ENST00000335972 PEX26Q7Z412 305 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 CELF4Q9BZC1 486 aaKnown RBP16.18■□□□□ 0.18
UBA1-201ENST00000335972 AGPAT3Q9NRZ7 376 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 CCPG1Q9ULG6 757 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 TMEM110-MUSTN1A8MSY1 372 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 K7ENM7 598 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 H2AFZP0C0S5 128 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 ALAS1P13196 640 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 FMO5P49326 533 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 ZNF211Q13398 564 aaPredicted RBP16.18■□□□□ 0.18
UBA1-201ENST00000335972 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 H2AFVQ71UI9 128 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 ZNF720Q7Z2F6 126 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 FIZ1Q96SL8 496 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 ZNF341Q9BYN7 854 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
UBA1-201ENST00000335972 HSF2BPO75031 334 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 CYP3A4P08684 503 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 IFT20Q8IY31 132 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 USP38Q8NB14 1042 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 TPCN2Q8NHX9 752 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 FZD1Q9UP38 647 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 NR2E1Q9Y466 385 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 FLOT1O75955 427 aa16.17■□□□□ 0.18
UBA1-201ENST00000335972 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms