RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 STBD1O95210 358 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 NDUFA10O95299 355 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 PSAPP07602 524 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 ACTR2P61160 394 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 GNG11P61952 73 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 WDR24Q96S15 920 aa19.66■□□□□ 0.74
ACTB-201ENST00000331789 LSM14BQ9BX40 385 aaKnown RBP19.66■□□□□ 0.74
ACTB-201ENST00000331789 IRX2Q9BZI1 471 aaPredicted RBP19.66■□□□□ 0.74
ACTB-201ENST00000331789 REXO2Q9Y3B8 237 aaKnown RBP19.66■□□□□ 0.74
ACTB-201ENST00000331789 MYH9P35579 1960 aaKnown RBP19.66■□□□□ 0.74
ACTB-201ENST00000331789 DYNC1I1O14576 645 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 SLC16A3O15427 465 aaKnown RBP19.65■□□□□ 0.74
ACTB-201ENST00000331789 NOL4O94818 638 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 ABL1P00519 1130 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 PLS3P13797 630 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 APBA1Q02410 837 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 ABHD15Q6UXT9 468 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 FASTKD5Q7L8L6 764 aaKnown RBP19.65■□□□□ 0.74
ACTB-201ENST00000331789 PNMA8AQ86V59 439 aaPredicted RBP19.65■□□□□ 0.74
ACTB-201ENST00000331789 BAP1Q92560 729 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 ZNF408Q9H9D4 720 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 LARSQ9P2J5 1176 aaKnown RBP19.65■□□□□ 0.74
ACTB-201ENST00000331789 ARID2Q68CP9 1835 aa19.65■□□□□ 0.74
ACTB-201ENST00000331789 EPB41P11171 864 aaKnown RBP19.64■□□□□ 0.74
ACTB-201ENST00000331789 OSBPP22059 807 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 ICAM3P32942 547 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 NFIL3Q16649 462 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 FAM102BQ5T8I3 360 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 MAP1SQ66K74 1059 aaPredicted RBP19.64■□□□□ 0.74
ACTB-201ENST00000331789 RRAGAQ7L523 313 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 CYFIP1Q7L576 1253 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 GPIHBP1Q8IV16 184 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 CCDC60Q8IWA6 550 aaPredicted RBP19.64■□□□□ 0.74
ACTB-201ENST00000331789 GBP3Q9H0R5 595 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 NHEJ1Q9H9Q4 299 aaPredicted RBP19.64■□□□□ 0.74
ACTB-201ENST00000331789 AGPAT3Q9NRZ7 376 aa19.64■□□□□ 0.74
ACTB-201ENST00000331789 LRRC53A6NM62 1247 aa19.64■□□□□ 0.73
ACTB-201ENST00000331789 GRIN3BO60391 1043 aa19.64■□□□□ 0.73
ACTB-201ENST00000331789 DCAF17Q5H9S7 520 aaPredicted RBP19.64■□□□□ 0.73
ACTB-201ENST00000331789 SYCP3Q8IZU3 236 aa19.64■□□□□ 0.73
ACTB-201ENST00000331789 SLC10A4Q96EP9 437 aa19.64■□□□□ 0.73
ACTB-201ENST00000331789 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 PLEKP08567 350 aaPredicted RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 MAPTP10636 758 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 HNRNPH3P31942 346 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 CYP2J2P51589 502 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 PDXDC1Q6P996 788 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 OTUD6AQ7L8S5 288 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 FAM133AQ8N9E0 248 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 ATP6V0A1Q93050 837 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 BORCS6Q96GS4 357 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 DRC1Q96MC2 740 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 TIPINQ9BVW5 301 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 METTL14Q9HCE5 456 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 NLRC4Q9NPP4 1024 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 DMAC2Q9NW81 257 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 PLAGL2Q9UPG8 496 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 ZNFX1Q9P2E3 1918 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 CTIFO43310 598 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 SLC25A27O95847 323 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 PGK2P07205 417 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 SUPT20HL2P0C7V6 817 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 XRCC5P13010 732 aaKnown RBP19.63■□□□□ 0.73
ACTB-201ENST00000331789 ARHGAP25P42331 645 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 PEX3P56589 373 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 CDK17Q00537 523 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 MIS18BP1Q6P0N0 1132 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 CACNA2D4Q7Z3S7 1137 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 CEP170P1Q96L14 293 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 EDEM3Q9BZQ6 932 aa19.63■□□□□ 0.73
ACTB-201ENST00000331789 SLC16A4O15374 487 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 EDNRBP24530 442 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 CASQ1P31415 396 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 PSMC2P35998 433 aaKnown RBP19.62■□□□□ 0.73
ACTB-201ENST00000331789 SOX10P56693 466 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 TCERG1LQ5VWI1 586 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 ILDR2Q71H61 639 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 FAM186BQ8IYM0 893 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 SLC35C1Q96A29 364 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 CEP72Q9P209 647 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 SRCAPQ6ZRS2 3230 aa19.62■□□□□ 0.73
ACTB-201ENST00000331789 TISP43B9A030 160 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 DKC1O60832 514 aaKnown RBP eCLIP19.61■□□□□ 0.73
ACTB-201ENST00000331789 POLR2FP61218 127 aaKnown RBP19.61■□□□□ 0.73
ACTB-201ENST00000331789 PRKCEQ02156 737 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 PPP2R3AQ06190 1150 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 SNAPC2Q13487 334 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 ARHGAP29Q52LW3 1261 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 HAUS6Q7Z4H7 955 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 ZNF526Q8TF50 670 aaPredicted RBP19.61■□□□□ 0.73
ACTB-201ENST00000331789 ACCSQ96QU6 501 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 L2HGDHQ9H9P8 463 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 ARHGAP20Q9P2F6 1191 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 ACTN1P12814 892 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 SLC9A1P19634 815 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 CYLC1P35663 651 aaPredicted RBP19.61■□□□□ 0.73
ACTB-201ENST00000331789 ALCAMQ13740 583 aa19.61■□□□□ 0.73
ACTB-201ENST00000331789 DPY19L2P1Q6NXN4 242 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms