RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ADAM7Q9H2U9 754 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 PANK4Q9NVE7 773 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 ARPP21Q9UBL0 812 aaPredicted RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 UTP11Q9Y3A2 253 aaKnown RBP19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 CYTH3O43739 400 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 SHBGP04278 402 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 ATP8B4Q8TF62 1192 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 FMO2Q99518 471 aa19.68■□□□□ 0.74
CLSTN3-202ENST00000331148 TRAF5O00463 557 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 GNAQP50148 359 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 PTK2Q05397 1052 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 NEK8Q86SG6 692 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 MYOCDQ8IZQ8 938 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 TPCN2Q8NHX9 752 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 ELAC2Q9BQ52 826 aaKnown RBP19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 ZNF219Q9P2Y4 722 aaPredicted RBP19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 SUGT1Q9Y2Z0 365 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 GPR75-ASB3A0A0A6YYF3 556 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 NQO1P15559 274 aaKnown RBP19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 PSMD2Q13200 908 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 C7orf43Q8WVR3 580 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 TRIM51Q9BSJ1 452 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 EPB41L4BQ9H329 900 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 ABCF3Q9NUQ8 709 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 MCM9Q9NXL9 1143 aa19.67■□□□□ 0.74
CLSTN3-202ENST00000331148 NUDT17P0C025 328 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 BTDP43251 543 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 KCNJ2P63252 427 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 ZNF571Q7Z3V5 609 aaPredicted RBP19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 PEX26Q7Z412 305 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 TRIM59Q8IWR1 403 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 PGM2Q96G03 612 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 CDK5RAP3Q96JB5 506 aa19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.66■□□□□ 0.74
CLSTN3-202ENST00000331148 TXKP42681 527 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 POU5F1Q01860 360 aaKnown RBP19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 ICA1Q05084 483 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 CC2D2BQ6DHV5 1058 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 PODNQ7Z5L7 613 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 DNAAF5Q86Y56 855 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 RAD54LQ92698 747 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 DDX12PQ92771 950 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 TRIM31Q9BZY9 425 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 MTFR1LQ9H019 292 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 ZMYND12Q9H0C1 365 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 CCDC134Q9H6E4 229 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 KANSL2Q9H9L4 492 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 STXBP5LQ9Y2K9 1186 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 LAMB1P07942 1786 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 SMNDC1O75940 238 aaKnown RBP eCLIP19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 PLCG2P16885 1265 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 NCALDP61601 193 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 DGKHQ86XP1 1220 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 EGFL6Q8IUX8 553 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 CEP63Q96MT8 703 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 KIF9Q9HAQ2 790 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 IL17RBQ9NRM6 502 aa19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 SUCLA2Q9P2R7 463 aaPredicted RBP19.65■□□□□ 0.74
CLSTN3-202ENST00000331148 ALDH5A1P51649 535 aaPredicted RBP19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 SARNPP82979 210 aaKnown RBP19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 SLFN11Q7Z7L1 901 aa19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 TGFBRAP1Q8WUH2 860 aa19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 PRMT1Q99873 361 aaKnown RBP19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 INTS9Q9NV88 658 aaKnown RBP19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 KCNG1Q9UIX4 513 aa19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 NAGPAQ9UK23 515 aa19.64■□□□□ 0.74
CLSTN3-202ENST00000331148 C10orf71Q711Q0 1435 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 GAKO14976 1311 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 DIAPH2O60879 1101 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 UBOX5O94941 541 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 VIMP08670 466 aaKnown RBP19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 RARAP10276 462 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 NAPAP54920 295 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 TFAP4Q01664 338 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 CAPRIN2Q6IMN6 1127 aaKnown RBP19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 IRF2BP2Q7Z5L9 587 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 NEK9Q8TD19 979 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 NSRP1Q9H0G5 558 aaKnown RBP19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 RAB17Q9H0T7 212 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 AZI2Q9H6S1 392 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 SPATS2LQ9NUQ6 558 aaKnown RBP19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 SLC5A4Q9NY91 659 aa19.64■□□□□ 0.73
CLSTN3-202ENST00000331148 MYH4Q9Y623 1939 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 EME2A4GXA9 379 aaPredicted RBP19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 INHBEP58166 350 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 COASYQ13057 564 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 CERS5Q8N5B7 392 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 DBNDD1Q9H9R9 158 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 ZDHHC18Q9NUE0 388 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 GNA14O95837 355 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 PMS2P54278 862 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 MARSP56192 900 aaKnown RBP19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 C12orf60Q5U649 245 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 DENND2CQ68D51 928 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 MIS18BP1Q6P0N0 1132 aa19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 ALKBH5Q6P6C2 394 aaKnown RBP19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 DHX37Q8IY37 1157 aaKnown RBP19.63■□□□□ 0.73
CLSTN3-202ENST00000331148 TBCKQ8TEA7 893 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms