RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 GRAPQ13588 217 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 STXBP2Q15833 593 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 TTC23LQ6PF05 361 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 ZNF341Q9BYN7 854 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 G3BP2Q9UN86 482 aaKnown RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 SKIP12755 728 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 ACRBPQ8NEB7 543 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 HUS1O60921 280 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 ARL4CP56559 192 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 SAMSN1Q9NSI8 373 aaKnown RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 PCDHB6Q9Y5E3 794 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 ARL6IP4Q66PJ3 421 aaKnown RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 LCA5Q86VQ0 697 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 SUDS3Q9H7L9 328 aaPredicted RBP16.51■□□□□ 0.23
PTPN21-201ENST00000328736 STRIP2Q9ULQ0 834 aa16.51■□□□□ 0.23
PTPN21-201ENST00000328736 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 PODXLO00592 558 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 NEMP1O14524 444 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 TFDP2Q14188 446 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 PPP4R4Q6NUP7 873 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ACAD11Q709F0 780 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 KIF1BO60333 1816 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ENOX1Q8TC92 643 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 DDX5P17844 614 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 SLCO1A2P46721 670 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 CDK8P49336 464 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 PEX3P56589 373 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 CAPRIN1Q14444 709 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 FAM133BQ5BKY9 247 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 MTBPQ96DY7 904 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 HOXC10Q9NYD6 342 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 SUGT1Q9Y2Z0 365 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ASNSP08243 561 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 NFX1Q12986 1120 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 NGRNQ9NPE2 291 aaKnown RBP16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ZSWIM5Q9P217 1185 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 ZBBXA8MT70 800 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 EFCAB14O75071 495 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 DCTN3O75935 186 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 SASH1O94885 1247 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 NNTQ13423 1086 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 CAPN11Q9UMQ6 739 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 USP6P35125 1406 aa16.5■□□□□ 0.23
PTPN21-201ENST00000328736 WDR91A4D1P6 747 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 COPEO14579 308 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 CALB1P05937 261 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 NDST4Q9H3R1 872 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 CCDC151A5D8V7 595 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 SYF2O95926 243 aaKnown RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 LMNAP02545 664 aaKnown RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 IFNAR1P17181 557 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 HOXD10P28358 340 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 GPC3P51654 580 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 MXD4Q14582 209 aaPredicted RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 WDR75Q8IWA0 830 aaKnown RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 MASTLQ96GX5 879 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 TEDDM1Q5T9Z0 273 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 PDXDC1Q6P996 788 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 TTC8Q8TAM2 541 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 PAGE5Q96GU1 130 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 PANX2Q96RD6 677 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 TRIM55Q9BYV6 548 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 HADHAP40939 763 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 STX18Q9P2W9 335 aaKnown RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 ZNF189O75820 626 aaPredicted RBP16.49■□□□□ 0.23
PTPN21-201ENST00000328736 MAPK6Q16659 721 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
PTPN21-201ENST00000328736 E2F6O75461 281 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 KRT38O76015 456 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 MCF2P10911 925 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 HOXA13P31271 388 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-201ENST00000328736 PRELPP51888 382 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 MECOMQ03112 1051 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 TMEM35BQ8NCS4 154 aa16.48■□□□□ 0.23
PTPN21-201ENST00000328736 ULK4Q96C45 1275 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms