RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 MINPP1Q9UNW1 487 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 TRAF3IP3Q9Y228 551 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 DAAM1Q9Y4D1 1078 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 KDM3AQ9Y4C1 1321 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 KIAA0391O15091 583 aaKnown RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 SMNDC1O75940 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
GINS3-202ENST00000328514 WFS1O76024 890 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 HSPA6P17066 643 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 KIAA1755Q5JYT7 1200 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 INTS5Q6P9B9 1019 aaKnown RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 DAAM2Q86T65 1068 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 SLC30A5Q8TAD4 765 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 OLIG1Q8TAK6 271 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 TBC1D16Q8TBP0 767 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 ZNF483Q8TF39 744 aaPredicted RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 ZNF570Q96NI8 536 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 ELAC2Q9BQ52 826 aaKnown RBP12.22□□□□□ -0.45
GINS3-202ENST00000328514 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 RIOX1Q9H6W3 641 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 HDAC9Q9UKV0 1011 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
GINS3-202ENST00000328514 WTIPA6NIX2 430 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 DDX3XO00571 662 aaKnown RBP eCLIP12.21□□□□□ -0.45
GINS3-202ENST00000328514 TMEM253P0C7T8 217 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 SKIV2L2P42285 1042 aaKnown RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 CCNHP51946 323 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 MAPK7Q13164 816 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 EPHA7Q15375 998 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 CNGA2Q16280 664 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 ECM1Q16610 540 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 ASRGL1Q7L266 308 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 RFFLQ8WZ73 363 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 THOC1Q96FV9 657 aaKnown RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 TRIM51Q9BSJ1 452 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 FGFBP2Q9BYJ0 223 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 ROPN1BQ9BZX4 212 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 ROPN1Q9HAT0 212 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 SIX2Q9NPC8 291 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 ARMCX3Q9UH62 379 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 NR2E1Q9Y466 385 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 L3MBTL1Q9Y468 752 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 USP15Q9Y4E8 981 aaPredicted RBP12.21□□□□□ -0.45
GINS3-202ENST00000328514 ABCA3Q99758 1704 aa12.21□□□□□ -0.45
GINS3-202ENST00000328514 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 UBOX5O94941 541 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.46
GINS3-202ENST00000328514 GJB6O95452 261 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 TDP2O95551 362 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 ACTN1P12814 892 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 FERP16591 822 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 SLC9A1P19634 815 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 RASA1P20936 1047 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 PRDX5P30044 214 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.46
GINS3-202ENST00000328514 COPS2P61201 443 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 BLMHQ13867 455 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 PLS1Q14651 629 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 DCAF12L1Q5VU92 463 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.46
GINS3-202ENST00000328514 MIS18BP1Q6P0N0 1132 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 TAOK1Q7L7X3 1001 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 JAMLQ86YT9 394 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 ZNF444Q8N0Y2 327 aaPredicted RBP12.21□□□□□ -0.46
GINS3-202ENST00000328514 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 IFT74Q96LB3 600 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 AZI2Q9H6S1 392 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 GRHL1Q9NZI5 618 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 RASAL2Q9UJF2 1139 aa12.21□□□□□ -0.46
GINS3-202ENST00000328514 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 PODXLO00592 558 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
GINS3-202ENST00000328514 SUN1O94901 812 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 PTGIRP43119 386 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
GINS3-202ENST00000328514 KCNJ2P63252 427 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 IFI35P80217 286 aaPredicted RBP12.2□□□□□ -0.46
GINS3-202ENST00000328514 SLC29A2Q14542 456 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 ENOX2Q16206 610 aaKnown RBP12.2□□□□□ -0.46
GINS3-202ENST00000328514 ZNF568Q3ZCX4 644 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 PPP1R18Q6NYC8 613 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 SPDL1Q96EA4 605 aa12.2□□□□□ -0.46
GINS3-202ENST00000328514 SYT11Q9BT88 431 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms