RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 STILQ15468 1287 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 GABBR1Q9UBS5 961 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
COL4A5-201ENST00000328300 H7C0C1 242 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 IFNB1P01574 187 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 HOXC6P09630 235 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 ATP5OP48047 213 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 DSTYKQ6XUX3 929 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
COL4A5-201ENST00000328300 KRT1P04264 644 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 DPEP1P16444 411 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 HPDP32754 393 aaPredicted RBP12.3□□□□□ -0.44
COL4A5-201ENST00000328300 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 ANKRD13AQ8IZ07 590 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 UBR1Q8IWV7 1749 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 DTNBO60941 627 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 KIAA1841Q6NSI8 718 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 ZBTB33Q86T24 672 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 NME8Q8N427 588 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 FAM71BQ8TC56 605 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 TTC1Q99614 292 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 EPB41L4AQ9HCS5 686 aaPredicted RBP12.3□□□□□ -0.44
COL4A5-201ENST00000328300 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 TOGARAM2Q6ZUX3 1019 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 POLR3FQ9H1D9 316 aaPredicted RBP12.3□□□□□ -0.44
COL4A5-201ENST00000328300 CCDC68Q9H2F9 335 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 SMARCAD1Q9H4L7 1026 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 E9PMD0 336 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 PDHBP11177 359 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 COG7P83436 770 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 MTMR2Q13614 643 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
COL4A5-201ENST00000328300 SRGAP2CP0DJJ0 459 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 RWDD2BP57060 319 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 DNAJC12Q9UKB3 198 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 HMGCS2P54868 508 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 MID2Q9UJV3 735 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 SYNGAP1Q96PV0 1343 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 SREBF2Q12772 1141 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 ZBTB9Q96C00 473 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 FAM205AQ6ZU69 1335 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 GH1P01241 217 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 CDC25AP30304 524 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 VAMP7P51809 220 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 CUL1Q13616 776 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 TFDP2Q14188 446 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 C15orf52Q6ZUT6 534 aaKnown RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 EEPD1Q7L9B9 569 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 STMN2Q93045 179 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 MAGOHBQ96A72 148 aaKnown RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 HEXIM2Q96MH2 286 aaKnown RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 PSMB7Q99436 277 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 CNTNAP5Q8WYK1 1306 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 POTECB2RU33 542 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.445e-6■□□□□ 8.9
COL4A5-201ENST00000328300 HUS1O60921 280 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 STX2P32856 288 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 GMPSP49915 693 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-201ENST00000328300 NAA25Q14CX7 972 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 OR6B2Q6IFH4 312 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 SWSAP1Q6NVH7 229 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 PRR12Q9ULL5 1215 aa12.29□□□□□ -0.44
COL4A5-201ENST00000328300 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 TSPY1Q01534 308 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 SGO2Q562F6 1265 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 RNF139Q8WU17 664 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■■■ 58.8
COL4A5-201ENST00000328300 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 ANKEF1Q9NU02 776 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 PXDNQ92626 1479 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 PLSCR1O15162 318 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 EIF3BP55884 814 aaKnown RBP12.28□□□□□ -0.44
COL4A5-201ENST00000328300 SNAP25P60880 206 aa12.28□□□□□ -0.44
COL4A5-201ENST00000328300 ZNF699Q32M78 642 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms