RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 HES6Q96HZ4 224 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 TYW1Q9NV66 732 aaKnown RBP15.86■□□□□ 0.13
SSBP3-201ENST00000326956 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-201ENST00000326956 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 DIS3Q9Y2L1 958 aaKnown RBP15.86■□□□□ 0.13
SSBP3-201ENST00000326956 IRS2Q9Y4H2 1338 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 CAND2O75155 1236 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 UFL1O94874 794 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 MMEP08473 750 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 PLTPP55058 493 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 KCTD1Q719H9 257 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 SLC35G2Q8TBE7 412 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 RFFLQ8WZ73 363 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 CD209Q9NNX6 404 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 SAMD15Q9P1V8 674 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 SPATA31A1Q5TZJ5 1347 aa15.86■□□□□ 0.13
SSBP3-201ENST00000326956 GNPATO15228 680 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 RGS16O15492 202 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-201ENST00000326956 DRD4P21917 467 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 GIT2Q14161 759 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 E2F5Q15329 346 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 PPP1R7Q15435 360 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 TAX1BP1Q86VP1 789 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 GLYCTKQ8IVS8 523 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 KDM4CQ9H3R0 1056 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 OSGEPQ9NPF4 335 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 MYH7BA7E2Y1 1941 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 FRMD3A2A2Y4 597 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 BHMG1C9JSJ3 638 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-201ENST00000326956 RGL2O15211 777 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 EVI5O60447 810 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-201ENST00000326956 PPFIA2O75334 1257 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 TRIM37O94972 964 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 PMS2P54278 862 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.136e-12■■■■■ 79.1
SSBP3-201ENST00000326956 LACTB2Q53H82 288 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-201ENST00000326956 PRR16Q569H4 304 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 N4BP2L2Q92802 583 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-201ENST00000326956 ERP44Q9BS26 406 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 ANO3Q9BYT9 981 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 FAM129AQ9BZQ8 928 aa15.85■□□□□ 0.13
SSBP3-201ENST00000326956 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CHN1P15882 459 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 ELF1P32519 619 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CASP4P49662 377 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 PTENP60484 403 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 ERMARDQ5T6L9 678 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CATSPER3Q86XQ3 398 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SEC14L1Q92503 715 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CCDC113Q9H0I3 377 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 VEZTQ9HBM0 779 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 STRCQ7RTU9 1775 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 FAM170AA1A519 330 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SLC16A3O15427 465 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 VIMP08670 466 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 GHRP10912 638 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 TNFAIP3P21580 790 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 NOVP48745 357 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 RHBDL3P58872 404 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CLUL1Q15846 466 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SPRED3Q2MJR0 410 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SPDYCQ5MJ68 293 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 HIBCHQ6NVY1 386 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SLC35C1Q96A29 364 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CENPTQ96BT3 561 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 INTS9Q9NV88 658 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 MTRF1LQ9UGC7 380 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 TPX2Q9ULW0 747 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SNX24Q9Y343 169 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 ATP8B3O60423 1300 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 FAM187AA6NFU0 413 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 CCT8L1PA6NM43 557 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 RFC4P35249 363 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SOX5P35711 763 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 SLC51AQ86UW1 340 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 TLCD1Q96CP7 247 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 NSRP1Q9H0G5 558 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 PABPC3Q9H361 631 aaKnown RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 BAIAP2L1Q9UHR4 511 aa15.84■□□□□ 0.13
SSBP3-201ENST00000326956 TTC7AQ9ULT0 858 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-201ENST00000326956 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.13
SSBP3-201ENST00000326956 TMEM253P0C7T8 217 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 COPB2P35606 906 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 JAM2P57087 298 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 PSMC6P62333 389 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 ZNF211Q13398 564 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 XRCC4Q13426 336 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 CROCCP2Q86T23 111 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 SYT2Q8N9I0 419 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-201ENST00000326956 CCT6BQ92526 530 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 GLG1Q92896 1179 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 CARD9Q9H257 536 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 KCNMB3Q9NPA1 279 aa15.83■□□□□ 0.12
SSBP3-201ENST00000326956 MCM8Q9UJA3 840 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms